RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 SLC9A7Q96T83 725 aa7.74□□□□□ -1.17
NUP54-204ENST00000506098 TMEM175Q9BSA9 504 aa7.74□□□□□ -1.17
NUP54-204ENST00000506098 LSM14BQ9BX40 385 aaKnown RBP7.74□□□□□ -1.17
NUP54-204ENST00000506098 BCO2Q9BYV7 579 aa7.74□□□□□ -1.17
NUP54-204ENST00000506098 IMPG2Q9BZV3 1241 aa7.74□□□□□ -1.17
NUP54-204ENST00000506098 CWH43Q9H720 699 aa7.74□□□□□ -1.17
NUP54-204ENST00000506098 NRDE2Q9H7Z3 1164 aa7.74□□□□□ -1.17
NUP54-204ENST00000506098 GOLGA2P5Q9HBQ8 144 aa7.74□□□□□ -1.17
NUP54-204ENST00000506098 APOBEC3GQ9HC16 384 aaKnown RBP7.74□□□□□ -1.17
NUP54-204ENST00000506098 GDAP2Q9NXN4 497 aa7.74□□□□□ -1.17
NUP54-204ENST00000506098 MYO6Q9UM54 1294 aa7.74□□□□□ -1.17
NUP54-204ENST00000506098 AGAP1Q9UPQ3 857 aa7.74□□□□□ -1.17
NUP54-204ENST00000506098 INPP5FQ9Y2H2 1132 aa7.74□□□□□ -1.17
NUP54-204ENST00000506098 NUB1Q9Y5A7 615 aa7.74□□□□□ -1.17
NUP54-204ENST00000506098 COL4A4P53420 1690 aaPredicted RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 TBKBP1A7MCY6 615 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 KPNA7A9QM74 516 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 RNF225M0QZC1 329 aaPredicted RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 PODXLO00592 558 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 PPEF2O14830 753 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 B4GALT3O60512 393 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 UPP2O95045 317 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 KRT19P08727 400 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 TRIM21P19474 475 aaKnown RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 CASP14P31944 242 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 MAGEA10P43363 369 aaPredicted RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 TAF6P49848 677 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 GATMP50440 423 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 FXR1P51114 621 aaKnown RBP eCLIP7.73□□□□□ -1.17
NUP54-204ENST00000506098 CLCNKBP51801 687 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 MFAP3P55082 362 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 LILRA4P59901 499 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 POLR2FP61218 127 aaKnown RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 FAM193AP78312 1265 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 ZBED6P86452 979 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 CCDC173Q0VFZ6 552 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 MYO1EQ12965 1108 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 ZNF699Q32M78 642 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 SV2CQ496J9 727 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 ZNF667Q5HYK9 610 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 IQCEQ6IPM2 695 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 SPOPLQ6IQ16 392 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 DCLRE1AQ6PJP8 1040 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 DPH6Q7L8W6 267 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 ARHGEF19Q8IW93 802 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 LRRC43Q8N309 656 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 UBR7Q8N806 425 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 TC2NQ8N9U0 490 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 SP7Q8TDD2 431 aaPredicted RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 BAP1Q92560 729 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 SYN2Q92777 582 aaPredicted RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 HPDLQ96IR7 371 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 PCMTD1Q96MG8 357 aaPredicted RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 KREMEN1Q96MU8 473 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 FAM193BQ96PV7 902 aaPredicted RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 GDF15Q99988 308 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 PAAF1Q9BRP4 392 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 PI4K2AQ9BTU6 479 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 STK33Q9BYT3 514 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 GPR88Q9GZN0 384 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 NUCKS1Q9H1E3 243 aaKnown RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 MTIF3Q9H2K0 278 aaKnown RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 CYP3A43Q9HB55 503 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 UBE2TQ9NPD8 197 aaPredicted RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 FAM207AQ9NSI2 230 aaPredicted RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 CXXC1Q9P0U4 656 aaPredicted RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 PCDH10Q9P2E7 1040 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 DNAJC12Q9UKB3 198 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 CNTN6Q9UQ52 1028 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 LUC7L2Q9Y383 392 aaKnown RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 R3HCC1Q9Y3T6 440 aaKnown RBP7.73□□□□□ -1.17
NUP54-204ENST00000506098 INSL6Q9Y581 213 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 FHOD1Q9Y613 1164 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 SLC4A7Q9Y6M7 1214 aa7.73□□□□□ -1.17
NUP54-204ENST00000506098 CASTOR2A6NHX0 329 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 ZBBXA8MT70 800 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 AKR1B15C9JRZ8 316 aaPredicted RBP7.72□□□□□ -1.17
NUP54-204ENST00000506098 M0QZQ0 153 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 NRP1O14786 923 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 SPTLC1O15269 473 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 TACC1O75410 805 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 EFEMP2O95967 443 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 ALDH2P05091 517 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 GALTP07902 379 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 TPM1P09493 284 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 P4HA1P13674 534 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 IBSPP21815 317 aaPredicted RBP7.72□□□□□ -1.17
NUP54-204ENST00000506098 FECHP22830 423 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 HNRNPH3P31942 346 aaKnown RBP7.72□□□□□ -1.17
NUP54-204ENST00000506098 BMP8BP34820 402 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 ASPAP45381 313 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 TERF1P54274 439 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 GSDMDP57764 484 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 APBA1Q02410 837 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 RNASELQ05823 741 aaKnown RBP7.72□□□□□ -1.17
NUP54-204ENST00000506098 CUL2Q13617 745 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 WDR72Q3MJ13 1102 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 GJB7Q6PEY0 223 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 CACNA2D4Q7Z3S7 1137 aa7.72□□□□□ -1.17
NUP54-204ENST00000506098 PPFIBP1Q86W92 1011 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms