RNA–Protein interactions for RNA: ENST00000505972.2

CTD-3080P12.3-201, humanhuman

TSL 3

Gene CTD-3080P12.3, Length 697 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-3080P12.3-201ENST00000505972 NLRC4Q9NPP4 1024 aa13.36□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 NXF1Q9UBU9 619 aaKnown RBP13.36□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 LUC7L2Q9Y383 392 aaKnown RBP13.36□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 PTPRSQ13332 1948 aa13.36□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 KPNA7A9QM74 516 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 AKR1B15C9JRZ8 316 aaPredicted RBP13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 B3GAT3O94766 335 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 GJB5O95377 273 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 ALDH2P05091 517 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 ATP2A2P16615 1042 aaKnown RBP13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 OR1G1P47890 313 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 GSDMDP57764 484 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 LILRA4P59901 499 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 ZBED6P86452 979 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 CUL2Q13617 745 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 BTG3Q14201 252 aaPredicted RBP13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 ARHGAP44Q17R89 818 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 CNGA4Q8IV77 575 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 JAKMIP2Q96AA8 810 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 ZNF689Q96CS4 500 aaPredicted RBP13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 PPP1R9BQ96SB3 815 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 PAAF1Q9BRP4 392 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 COLEC11Q9BWP8 271 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 NAA15Q9BXJ9 866 aaKnown RBP13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 CACNG4Q9UBN1 327 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 INSL6Q9Y581 213 aa13.35□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 RNF225M0QZC1 329 aaPredicted RBP13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 PTMAP06454 111 aaKnown RBP13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 KRT9P35527 623 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 FXR1P51114 621 aaKnown RBP eCLIP13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 YWHAEP62258 255 aaKnown RBP13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 HTRA4P83105 476 aaPredicted RBP13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 DRAP1Q14919 205 aaPredicted RBP13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 TSR1Q2NL82 804 aaKnown RBP13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 SPOUT1Q5T280 376 aaKnown RBP13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 RASIP1Q5U651 963 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 DSTYKQ6XUX3 929 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 CCDC186Q7Z3E2 898 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 FMNL3Q8IVF7 1028 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 HERC6Q8IVU3 1022 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 OR8K1Q8NGG5 319 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 BAP1Q92560 729 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 RABGGTAQ92696 567 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 KAT5Q92993 513 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 KREMEN1Q96MU8 473 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 MMS19Q96T76 1030 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 UBE2OQ9C0C9 1292 aaKnown RBP13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 NUCKS1Q9H1E3 243 aaKnown RBP13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 CYP3A43Q9HB55 503 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 RC3H2Q9HBD1 1191 aaKnown RBP13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 GDAP2Q9NXN4 497 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 DNAJB4Q9UDY4 337 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 AJAP1Q9UKB5 411 aaPredicted RBP13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 MYO6Q9UM54 1294 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 POLIQ9UNA4 740 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 FAN1Q9Y2M0 1017 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 SNX9Q9Y5X1 595 aa13.34□□□□□ -0.27
CTD-3080P12.3-201ENST00000505972 H0YGN5 161 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 TMEM189-UBE2V1I3L0A0 370 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 NRP1O14786 923 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 SPTLC1O15269 473 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 B4GALT3O60512 393 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 MFAP3LO75121 409 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 TADA2AO75478 443 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 GALTP07902 379 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 WEE2P0C1S8 567 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 STAT1P42224 750 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 ASPAP45381 313 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 SLC11A1P49279 550 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 ALDH7A1P49419 539 aaKnown RBP13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 RGS19P49795 217 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 ADKP55263 362 aaKnown RBP13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 JAM2P57087 298 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 SHHQ15465 462 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 C9orf50Q5SZB4 431 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 SFMBT2Q5VUG0 894 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 SMYD5Q6GMV2 418 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 PDXDC1Q6P996 788 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 SCARA5Q6ZMJ2 495 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 TTC39CQ8N584 583 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 TOP6BLQ8N6T0 577 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 RNPC3Q96LT9 517 aaKnown RBP13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 RAD9AQ99638 391 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 BCO2Q9BYV7 579 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 CWH43Q9H720 699 aa13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 PRG3Q9Y2Y8 225 aaPredicted RBP13.33□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 ARHGEF37A1IGU5 675 aa13.32□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 CARNS1A5YM72 827 aa13.32□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 LRRC53A6NM62 1247 aa13.32□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 F8VZ95 297 aa13.32□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 FOXN3O00409 490 aaPredicted RBP13.32□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 CYB561D2O14569 222 aa13.32□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 TRAPPC3O43617 180 aa13.32□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 TLL1O43897 1013 aa13.32□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 HUS1O60921 280 aa13.32□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 KIF4AO95239 1232 aa13.32□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 CCDC172P0C7W6 258 aa13.32□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 LAG3P18627 525 aa13.32□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 USP8P40818 1118 aa13.32□□□□□ -0.28
CTD-3080P12.3-201ENST00000505972 BCAR1P56945 870 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms