RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 PAK2Q13177 524 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 TUBB2AQ13885 445 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 LPIN1Q14693 890 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 ZNF667Q5HYK9 610 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 CCDC122Q5T0U0 273 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 PPP1R2P3Q6NXS1 205 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 SLC39A5Q6ZMH5 540 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 ANKRD33Q7Z3H0 272 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 FAM126BQ8IXS8 530 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 LRRC52Q8N7C0 313 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 SMG8Q8ND04 991 aaKnown RBP10.87□□□□□ -0.67
DDX41-203ENST00000504781 TUBB2BQ9BVA1 445 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 FTHL17Q9BXU8 183 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 NIF3L1Q9GZT8 377 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 AGO3Q9H9G7 860 aaKnown RBP10.87□□□□□ -0.67
DDX41-203ENST00000504781 LZTFL1Q9NQ48 299 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 SLC38A7Q9NVC3 462 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 PARP2Q9UGN5 583 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 SIX4Q9UIU6 781 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 KIAA1257Q9ULG3 409 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 AGAP1Q9UPQ3 857 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 ANO9A1A5B4 782 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 DDX3XO00571 662 aaKnown RBP eCLIP10.86□□□□□ -0.67
DDX41-203ENST00000504781 PIRO00625 290 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 RTN2O75298 545 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 RECQL4O94761 1208 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 ITGB3P05106 788 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 KRT19P08727 400 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 H2AFZP0C0S5 128 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 CYP11B1P15538 503 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 SELPP16109 830 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 ATF7P17544 494 aaPredicted RBP10.86□□□□□ -0.67
DDX41-203ENST00000504781 AKAP5P24588 427 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 PNPLA4P41247 253 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 ARHGAP25P42331 645 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 CDR2Q01850 454 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 IFI16Q16666 785 aaKnown RBP10.86□□□□□ -0.67
DDX41-203ENST00000504781 ZNF699Q32M78 642 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 WDR72Q3MJ13 1102 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 TRIM60Q495X7 471 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 H2AFVQ71UI9 128 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 Q7L0L9 218 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 KAT5Q92993 513 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 HPDLQ96IR7 371 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 C16orf45Q96MC5 204 aaPredicted RBP10.86□□□□□ -0.67
DDX41-203ENST00000504781 BCO2Q9BYV7 579 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 DNAI2Q9GZS0 605 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 ISCUQ9H1K1 167 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 NXF3Q9H4D5 531 aaKnown RBP10.86□□□□□ -0.67
DDX41-203ENST00000504781 RGS18Q9NS28 235 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 NENFQ9UMX5 172 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 HES2Q9Y543 173 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 PCDHB4Q9Y5E5 795 aa10.86□□□□□ -0.67
DDX41-203ENST00000504781 A0A0A6YYK5 440 aaPredicted RBP10.85□□□□□ -0.67
DDX41-203ENST00000504781 DCDC2CA8MYV0 355 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 CTSHP09668 335 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 KRT5P13647 590 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 LRPAP1P30533 357 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 CD52P31358 61 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 CASQ1P31415 396 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 RPL9P32969 192 aaKnown RBP10.85□□□□□ -0.67
DDX41-203ENST00000504781 PDE6CP51160 858 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 GNG11P61952 73 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 TCEAL1Q15170 157 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 SPOPLQ6IQ16 392 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 TRAF7Q6Q0C0 670 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 SYT10Q6XYQ8 523 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 TRIM72Q6ZMU5 477 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 SLC24A5Q71RS6 500 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 DPH6Q7L8W6 267 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 SLC47A2Q86VL8 602 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 RPUSD2Q8IZ73 545 aaKnown RBP10.85□□□□□ -0.67
DDX41-203ENST00000504781 DEFB123Q8N688 67 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 UBR7Q8N806 425 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 EPS8L1Q8TE68 723 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 DDX1Q92499 740 aaKnown RBP10.85□□□□□ -0.67
DDX41-203ENST00000504781 ZMAT2Q96NC0 199 aaKnown RBP10.85□□□□□ -0.67
DDX41-203ENST00000504781 ADAM2Q99965 735 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 LACRTQ9GZZ8 138 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 CISHQ9NSE2 258 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 NOCTQ9UK39 431 aaKnown RBP10.85□□□□□ -0.67
DDX41-203ENST00000504781 GUCA1BQ9UMX6 200 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 FRMPD3Q5JV73 1810 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 TRIP11Q15643 1979 aa10.85□□□□□ -0.67
DDX41-203ENST00000504781 ANKRD62A6NC57 917 aa10.84□□□□□ -0.67
DDX41-203ENST00000504781 RCCD1A6NED2 376 aa10.84□□□□□ -0.67
DDX41-203ENST00000504781 FTLP02792 175 aaPredicted RBP10.84□□□□□ -0.67
DDX41-203ENST00000504781 THP07101 528 aa10.84□□□□□ -0.67
DDX41-203ENST00000504781 PAEPP09466 180 aa10.84□□□□□ -0.67
DDX41-203ENST00000504781 TMEM253P0C7T8 217 aa10.84□□□□□ -0.67
DDX41-203ENST00000504781 PNMA6AP0CW24 399 aaPredicted RBP10.84□□□□□ -0.67
DDX41-203ENST00000504781 GHRP10912 638 aa10.84□□□□□ -0.67
DDX41-203ENST00000504781 CHRNB2P17787 502 aa10.84□□□□□ -0.67
DDX41-203ENST00000504781 POLR2BP30876 1174 aaKnown RBP10.84□□□□□ -0.67
DDX41-203ENST00000504781 LRIT3Q3SXY7 679 aa10.84□□□□□ -0.67
DDX41-203ENST00000504781 ZNF569Q5MCW4 686 aa10.84□□□□□ -0.67
DDX41-203ENST00000504781 C9orf57Q5W0N0 161 aa10.84□□□□□ -0.67
DDX41-203ENST00000504781 ACAD10Q6JQN1 1059 aa10.84□□□□□ -0.67
DDX41-203ENST00000504781 TMEM270Q6UE05 265 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms