RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 PRPF6O94906 941 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ECDO95905 644 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 TOP3BO95985 862 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 PNPP00491 289 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 CD4P01730 458 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 KCNA6P17658 529 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 RPL35P42766 123 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 MASP1P48740 699 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 NAA20P61599 178 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 CDR2Q01850 454 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 TRAP1Q12931 704 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 INSCQ1MX18 579 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ANO6Q4KMQ2 910 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 AGMOQ6ZNB7 445 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 SLAIN1Q8ND83 568 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 OR8H1Q8NGG4 311 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 DDX54Q8TDD1 881 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 NUDCD1Q96RS6 583 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 KCTD10Q9H3F6 313 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 METTL8Q9H825 291 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ZSWIM6Q9HCJ5 1215 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 POLIQ9UNA4 740 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 LRCH1Q9Y2L9 728 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 CCDC141Q6ZP82 1450 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ANO9A1A5B4 782 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 RGS5O15539 181 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 TSPAN6O43657 245 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 CHRM5P08912 532 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 PRLRP16471 622 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 HLA-FP30511 346 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 RCVRNP35243 200 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 GNG2P59768 71 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 BLMHQ13867 455 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 PLEKHO1Q53GL0 409 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 WLSQ5T9L3 541 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 GARNL3Q5VVW2 1013 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 AAGABQ6PD74 315 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 KIAA0408Q6ZU52 694 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ENOSF1Q7L5Y1 443 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 WNK4Q96J92 1243 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 PDCD10Q9BUL8 212 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 KLHL14Q9P2G3 628 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 PA2G4Q9UQ80 394 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 C9orf84Q5VXU9 1444 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 TRAV6A0A075B6T7 132 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 DPPA5A6NC42 116 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 KMOO15229 486 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 SPAG7O75391 227 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 CSF1RP07333 972 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 FAM163BP0C2L3 166 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ZAP70P43403 619 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 NR2C2P49116 596 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 PRIM2P49643 509 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 GPR85P60893 370 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 GFPT1Q06210 699 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 SLFN5Q08AF3 891 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 DOC2AQ14183 400 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 NCF4Q15080 339 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 EPC2Q52LR7 807 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 PITRM1Q5JRX3 1037 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 HYIQ5T013 277 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 KRT28Q7Z3Y7 464 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 BNIPLQ7Z465 357 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 POLNQ7Z5Q5 900 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 DNAJB8Q8NHS0 232 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 POF1BQ8WVV4 589 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 CLP1Q92989 425 aaKnown RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 NGLY1Q96IV0 654 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 L3MBTL3Q96JM7 780 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ALPK1Q96QP1 1244 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 TMEM79Q9BSE2 394 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 CHST12Q9NRB3 414 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 SNRKQ9NRH2 765 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 SIRPGQ9P1W8 387 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF510Q9Y2H8 683 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 TMEM221A6NGB7 291 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 RAB3DO95716 219 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 SYT1P21579 422 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 C21orf59P57076 290 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 TOP3AQ13472 1001 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 SIM2Q14190 667 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 SLC45A4Q5BKX6 768 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF598Q86UK7 904 aaKnown RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 CCDC103Q8IW40 242 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 HIPK4Q8NE63 616 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 RSAD2Q8WXG1 361 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 FATE1Q969F0 183 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 EME1Q96AY2 570 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 MSANTD3Q96H12 275 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 TCF12Q99081 682 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ERP44Q9BS26 406 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 KAT14Q9H8E8 782 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 PLGRKTQ9HBL7 147 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 TBCCD1Q9NVR7 557 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ZSCAN32Q9NX65 697 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 SERPINB13Q9UIV8 391 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 DOLKQ9UPQ8 538 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 GIT1Q9Y2X7 761 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms