RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 FOXD4Q12950 439 aaPredicted RBP17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 SMIM5Q71RC9 77 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 MARCH10Q8NA82 808 aaPredicted RBP17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 ARL8AQ96BM9 186 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 FAM129AQ9BZQ8 928 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 KIF20BQ96Q89 1820 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 ABCE1P61221 599 aaKnown RBP17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 STX3Q13277 289 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 ATPAF2Q8N5M1 289 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 XPO6Q96QU8 1125 aaKnown RBP17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 ERP44Q9BS26 406 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 YY1AP1Q9H869 796 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 KCNH7Q9NS40 1196 aa17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 COL3A1P02461 1466 aaPredicted RBP17.35■□□□□ 0.37
PCDHA1-203ENST00000504120 LRRC8EQ6NSJ5 796 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 C4orf22Q6V702 233 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 SLC38A7Q9NVC3 462 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 KIF17Q9P2E2 1029 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 DNAJC6O75061 913 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 ATXN8OSP0DMR3 200 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 GFAPP14136 432 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 DCAF4L1Q3SXM0 396 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 RIBC1Q8N443 379 aaPredicted RBP17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 OLFM3Q96PB7 478 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 TEKT2Q9UIF3 430 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 SPATA31A5Q5VU36 1347 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 SPATA31A7Q8IWB4 1347 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 KLK7P49862 253 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 NSMCE4AQ9NXX6 385 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 EEF2KO00418 725 aaKnown RBP17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 SNAPC2Q13487 334 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 AGAP3Q96P47 875 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 GPBP1L1Q9HC44 474 aaPredicted RBP17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 ARHGAP10A1A4S6 786 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 HNRNPCL2B2RXH8 293 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 RARBP10826 455 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 DDX5P17844 614 aaKnown RBP17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 KLRC1P26715 233 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 ALDH18A1P54886 795 aaKnown RBP17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 PTK2BQ14289 1009 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 DNAL1Q4LDG9 190 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 STYK1Q6J9G0 422 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 ANKRD7Q92527 254 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 KCNB2Q92953 911 aa17.34■□□□□ 0.37
PCDHA1-203ENST00000504120 SV2CQ496J9 727 aa17.33■□□□□ 0.37
PCDHA1-203ENST00000504120 AGGF1Q8N302 714 aaeCLIP17.33■□□□□ 0.37
PCDHA1-203ENST00000504120 ARHGAP18Q8N392 663 aa17.33■□□□□ 0.37
PCDHA1-203ENST00000504120 CEP70Q8NHQ1 597 aa17.33■□□□□ 0.37
PCDHA1-203ENST00000504120 AGR3Q8TD06 166 aa17.33■□□□□ 0.37
PCDHA1-203ENST00000504120 GPRASP2Q96D09 838 aa17.33■□□□□ 0.37
PCDHA1-203ENST00000504120 AFF4Q9UHB7 1163 aaKnown RBP17.33■□□□□ 0.37
PCDHA1-203ENST00000504120 DBR1Q9UK59 544 aaKnown RBP17.33■□□□□ 0.37
PCDHA1-203ENST00000504120 A0A0G2JLW4 131 aa17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 DYNC1LI2O43237 492 aaPredicted RBP17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 HBP1O60381 514 aa17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 KRT4P19013 534 aa17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 MAGEA4P43358 317 aa17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 EN1Q05925 392 aaPredicted RBP17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 PDK1Q15118 436 aa17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 CASS4Q9NQ75 786 aa17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 PCDHGB4Q9UN71 923 aa17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 FEZF2Q8TBJ5 459 aa17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 LZICQ8WZA0 190 aa17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 KDM4CQ9H3R0 1056 aa17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 MRGBPQ9NV56 204 aa17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 CHCHD3Q9NX63 227 aaKnown RBP17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 CACNB2Q08289 660 aaPredicted RBP17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 GPAT2Q6NUI2 795 aa17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 SH3KBP1Q96B97 665 aa17.33■□□□□ 0.36
PCDHA1-203ENST00000504120 ANGPT2O15123 496 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 GPD1P21695 349 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 GRIN1Q05586 938 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 ITPK1Q13572 414 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 PTPAQ15257 358 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 RABGAP1LQ5R372 815 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 SPATA18Q8TC71 538 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 UNC45AQ9H3U1 944 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 ERAP1Q9NZ08 941 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 CYP11B2P19099 503 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 PTK7Q13308 1070 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 PTPRN2Q92932 1015 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 NAF1Q96HR8 494 aaKnown RBP17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 OSBPL1AQ9BXW6 950 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 PIDD1Q9HB75 910 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 STX18Q9P2W9 335 aaKnown RBP17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 ENO1P06733 434 aaKnown RBP17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 SPRP35270 261 aaPredicted RBP17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 KDSRQ06136 332 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 MOXD1Q6UVY6 613 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 C4orf33Q8N1A6 199 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 PBXIP1Q96AQ6 731 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 PARK7Q99497 189 aaKnown RBP17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 CARD9Q9H257 536 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 AGPAT3Q9NRZ7 376 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 ARHGEF38Q9NXL2 777 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 GTF3C4Q9UKN8 822 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 PLAGL2Q9UPG8 496 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 KCNH4Q9UQ05 1017 aa17.32■□□□□ 0.36
PCDHA1-203ENST00000504120 CYBBP04839 570 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms