RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 HDAC10Q969S8 669 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 NACC2Q96BF6 587 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 SEMA4GQ9NTN9 838 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 TDP1Q9NUW8 608 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 TMEM140Q9NV12 185 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 FAM30AQ9NZY2 134 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 ZNF180Q9UJW8 692 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 IPPQ9Y573 584 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 CCDC78A2IDD5 438 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 LRRC14BA6NHZ5 514 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 INO80B-WBP1J3KQ70 363 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 MGST3O14880 152 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 TEX33O43247 280 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 AKAP10O43572 662 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 MATN4O95460 622 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 CKBP12277 381 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 DDCP20711 480 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 GUCY1A2P33402 732 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 CACNA2D1P54289 1103 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 TARDBPQ13148 414 aaKnown RBP eCLIP5.32□□□□□ -1.56
SUB1-204ENST00000504016 CYP2A13Q16696 494 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 TPH2Q8IWU9 490 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 COLGALT2Q8IYK4 626 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 ACTRT2Q8TDY3 377 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 JPH3Q8WXH2 748 aaPredicted RBP5.32□□□□□ -1.56
SUB1-204ENST00000504016 JDP2Q8WYK2 163 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 SSH1Q8WYL5 1049 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 CLPTM1LQ96KA5 538 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 RTFDC1Q9BY42 306 aaPredicted RBP5.32□□□□□ -1.56
SUB1-204ENST00000504016 INO80BQ9C086 356 aaPredicted RBP5.32□□□□□ -1.56
SUB1-204ENST00000504016 MANSC1Q9H8J5 431 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 UNKLQ9H9P5 680 aaKnown RBP5.32□□□□□ -1.56
SUB1-204ENST00000504016 FBXO34Q9NWN3 711 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 ZIM2Q9NZV7 527 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 FOXJ2Q9P0K8 574 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 FRMD4BQ9Y2L6 1034 aa5.32□□□□□ -1.56
SUB1-204ENST00000504016 TCRBV7S2A1N4TA0A589 114 aa5.31□□□□□ -1.56
SUB1-204ENST00000504016 KIAA0391O15091 583 aaKnown RBP5.31□□□□□ -1.56
SUB1-204ENST00000504016 GPR32O75388 356 aa5.31□□□□□ -1.56
SUB1-204ENST00000504016 PDCP20941 246 aa5.31□□□□□ -1.56
SUB1-204ENST00000504016 ADKP55263 362 aaKnown RBP5.31□□□□□ -1.56
SUB1-204ENST00000504016 ZNF280AP59817 542 aaPredicted RBP5.31□□□□□ -1.56
SUB1-204ENST00000504016 KRT85P78386 507 aa5.31□□□□□ -1.56
SUB1-204ENST00000504016 GLCCI1Q86VQ1 547 aa5.31□□□□□ -1.56
SUB1-204ENST00000504016 MARS2Q96GW9 593 aaKnown RBP5.31□□□□□ -1.56
SUB1-204ENST00000504016 PDLIM2Q96JY6 352 aa5.31□□□□□ -1.56
SUB1-204ENST00000504016 VRK1Q99986 396 aaPredicted RBP5.31□□□□□ -1.56
SUB1-204ENST00000504016 HEPHQ9BQS7 1158 aa5.31□□□□□ -1.56
SUB1-204ENST00000504016 SLC23A1Q9UHI7 598 aa5.31□□□□□ -1.56
SUB1-204ENST00000504016 PCDHB1Q9Y5F3 818 aa5.31□□□□□ -1.56
SUB1-204ENST00000504016 MYADML2A6NDP7 307 aa5.3□□□□□ -1.56
SUB1-204ENST00000504016 MYBP10242 640 aa5.3□□□□□ -1.56
SUB1-204ENST00000504016 VAV2P52735 878 aa5.3□□□□□ -1.56
SUB1-204ENST00000504016 NHLH1Q02575 133 aa5.3□□□□□ -1.56
SUB1-204ENST00000504016 PIN1Q13526 163 aaPredicted RBP5.3□□□□□ -1.56
SUB1-204ENST00000504016 SEM1Q6ZVN7 128 aa5.3□□□□□ -1.56
SUB1-204ENST00000504016 CASKIN2Q8WXE0 1202 aa5.3□□□□□ -1.56
SUB1-204ENST00000504016 PNKPQ96T60 521 aa5.3□□□□□ -1.56
SUB1-204ENST00000504016 RHOBTB2Q9BYZ6 727 aa5.3□□□□□ -1.56
SUB1-204ENST00000504016 GTPBP4Q9BZE4 634 aaKnown RBP5.3□□□□□ -1.56
SUB1-204ENST00000504016 KLK15Q9H2R5 256 aa5.3□□□□□ -1.56
SUB1-204ENST00000504016 GSTO2Q9H4Y5 243 aa5.3□□□□□ -1.56
SUB1-204ENST00000504016 KCTD5Q9NXV2 234 aa5.3□□□□□ -1.56
SUB1-204ENST00000504016 SLC17A6Q9P2U8 582 aa5.3□□□□□ -1.56
SUB1-204ENST00000504016 ANKRD6Q9Y2G4 727 aa5.3□□□□□ -1.56
SUB1-204ENST00000504016 LRRC3CA6NJW4 275 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 PEX1O43933 1283 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 ABLIM3O94929 683 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 SBK3P0C264 359 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 ALAS1P13196 640 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 WASP42768 502 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 MTM1Q13496 603 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 ZNF267Q14586 743 aaPredicted RBP5.29□□□□□ -1.56
SUB1-204ENST00000504016 KHDC1Q4VXA5 237 aaKnown RBP5.29□□□□□ -1.56
SUB1-204ENST00000504016 AKNAD1Q5T1N1 836 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 GADL1Q6ZQY3 521 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 GRAMD1CQ8IYS0 662 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 SH2D3CQ8N5H7 860 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 FITM2Q8N6M3 262 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 CYFIP2Q96F07 1278 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 KLHL42Q9P2K6 505 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 EID1Q9Y6B2 187 aa5.29□□□□□ -1.56
SUB1-204ENST00000504016 ARHGEF17Q96PE2 2063 aaPredicted RBP5.28□□□□□ -1.56
SUB1-204ENST00000504016 TRGV11A0A075B6L2 103 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 PRPF3O43395 683 aaKnown RBP5.28□□□□□ -1.56
SUB1-204ENST00000504016 AP1G1O43747 822 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 RBMXL2O75526 392 aaKnown RBP5.28□□□□□ -1.56
SUB1-204ENST00000504016 C1QL1O75973 258 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 POU2F2P09086 479 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 EPHB1P54762 984 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 KRTAP10-11P60412 298 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 NOMO3P69849 1222 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 ATP8B2P98198 1209 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 CDC42EP1Q00587 391 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 DSC2Q02487 901 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 CREMQ03060 361 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 GEN1Q17RS7 908 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 NOMO2Q5JPE7 1267 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 EPHA10Q5JZY3 1008 aa5.28□□□□□ -1.56
SUB1-204ENST00000504016 TMEM240Q5SV17 173 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms