RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SLC44A4Q53GD3 710 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 ZNF394Q53GI3 561 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 CPA5Q8WXQ8 436 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 PCSK1NQ9UHG2 260 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 IPO11Q9UI26 975 aaKnown RBP18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 TTC36A6NLP5 189 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 A8MXQ7 604 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 GNGT2O14610 69 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 AKR1B1P15121 316 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 PSMD7P51665 324 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 TRMT5Q32P41 509 aaKnown RBP18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 ZC2HC1CQ53FD0 456 aaPredicted RBP18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 FAM160B1Q5W0V3 765 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 GPD1LQ8N335 351 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 DDI1Q8WTU0 396 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 SLC24A2Q9UI40 661 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 UNC5CO95185 931 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 TYK2P29597 1187 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 INPP4AQ96PE3 977 aaPredicted RBP18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 SLC38A10Q9HBR0 1119 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 SAR1AQ9NR31 198 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 RHBDL2Q9NX52 303 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 XPO7Q9UIA9 1087 aaKnown RBP18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 ITPK1Q13572 414 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 TFDP1Q14186 410 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 MORF4L2Q15014 288 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 IZUMO2Q6UXV1 221 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 SCARA5Q6ZMJ2 495 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 CKAP2Q8WWK9 683 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 LZICQ8WZA0 190 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 PCDHB2Q9Y5E7 798 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 STRNO43815 780 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 MTERF2Q49AM1 385 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 CATSPER3Q86XQ3 398 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 SLC16A10Q8TF71 515 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 RIOK1Q9BRS2 568 aaKnown RBP18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 BTBD10Q9BSF8 475 aa18.09■□□□□ 0.49
HMGXB3-201ENST00000502717 SPATA31A5Q5VU36 1347 aa18.08■□□□□ 0.49
HMGXB3-201ENST00000502717 SPATA31A7Q8IWB4 1347 aa18.08■□□□□ 0.49
HMGXB3-201ENST00000502717 BCAR1P56945 870 aa18.08■□□□□ 0.49
HMGXB3-201ENST00000502717 OCRLQ01968 901 aa18.08■□□□□ 0.49
HMGXB3-201ENST00000502717 MTFR1Q15390 333 aa18.08■□□□□ 0.49
HMGXB3-201ENST00000502717 ADRM1Q16186 407 aa18.08■□□□□ 0.49
HMGXB3-201ENST00000502717 ARID3BQ8IVW6 561 aaPredicted RBP18.08■□□□□ 0.49
HMGXB3-201ENST00000502717 PPIL6Q8IXY8 311 aa18.08■□□□□ 0.49
HMGXB3-201ENST00000502717 MYLK2Q9H1R3 596 aa18.08■□□□□ 0.49
HMGXB3-201ENST00000502717 KLHL11Q9NVR0 708 aa18.08■□□□□ 0.49
HMGXB3-201ENST00000502717 KLRC4O43908 158 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 HSPA13P48723 471 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 CDO1Q16878 200 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 ACAD10Q6JQN1 1059 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 C16orf86Q6ZW13 317 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 FAM118BQ9BPY3 351 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 TIPINQ9BVW5 301 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 WARS2Q9UGM6 360 aaKnown RBP18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 WEE2P0C1S8 567 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 ZFXP17010 805 aaPredicted RBP18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 EPHB2P29323 1055 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 PSMC1P62191 440 aaKnown RBP18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 C16orf89Q6UX73 402 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 ZNF677Q86XU0 584 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 ZC3H7BQ9UGR2 993 aaKnown RBP18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 FECHP22830 423 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 PPP6R3Q5H9R7 873 aaPredicted RBP18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 TTC39BQ5VTQ0 682 aaPredicted RBP18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 RNF43Q68DV7 783 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 MCUQ8NE86 351 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 ATG4AQ8WYN0 398 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 PPP2R3CQ969Q6 453 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 DTNAQ9Y4J8 743 aa18.08■□□□□ 0.48
HMGXB3-201ENST00000502717 SORBS3O60504 671 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 SCG3Q8WXD2 468 aaKnown RBP18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 MAML3Q96JK9 1138 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 ING2Q9H160 280 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 CHORDC1Q9UHD1 332 aaPredicted RBP18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 C2CD2Q9Y426 696 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 FGFR2P21802 821 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 CDC25CP30307 473 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 RFC5P40937 340 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 COPAP53621 1224 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 DRG2P55039 364 aaKnown RBP18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 GPSM2P81274 684 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 MAPRE2Q15555 327 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 LRRC74BQ6ZQY2 392 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 SCFD2Q8WU76 684 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 EME1Q96AY2 570 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 ARHGEF26Q96DR7 871 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 HEXIM2Q96MH2 286 aaKnown RBP18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 TMEM237Q96Q45 408 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 KIFC3Q9BVG8 833 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 CHMP2BQ9UQN3 213 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 AP1G2O75843 785 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 PECAM1P16284 738 aaPredicted RBP18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 CRKP46108 304 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 SNRPFP62306 86 aaKnown RBP18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 PIGHQ14442 188 aaPredicted RBP18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 QPCTQ16769 361 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 CDKL3Q8IVW4 592 aaPredicted RBP18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 BAP1Q92560 729 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 AGPAT3Q9NRZ7 376 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms