RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 COMTP21964 271 aa7.73□□□□□ -1.17
NEDD4-203ENST00000502612 APOBEC3AP31941 199 aaPredicted RBP7.73□□□□□ -1.17
NEDD4-203ENST00000502612 SCNN1GP51170 649 aa7.73□□□□□ -1.17
NEDD4-203ENST00000502612 CASP5P51878 434 aa7.73□□□□□ -1.17
NEDD4-203ENST00000502612 DRICH1Q6PGQ1 229 aaPredicted RBP7.73□□□□□ -1.17
NEDD4-203ENST00000502612 MAMDC4Q6UXC1 1216 aa7.73□□□□□ -1.17
NEDD4-203ENST00000502612 SPOCD1Q6ZMY3 1216 aa7.73□□□□□ -1.17
NEDD4-203ENST00000502612 SLC17A8Q8NDX2 589 aa7.73□□□□□ -1.17
NEDD4-203ENST00000502612 IMPG2Q9BZV3 1241 aa7.73□□□□□ -1.17
NEDD4-203ENST00000502612 SMURF2Q9HAU4 748 aa7.73□□□□□ -1.17
NEDD4-203ENST00000502612 VSX1Q9NZR4 365 aaPredicted RBP7.73□□□□□ -1.17
NEDD4-203ENST00000502612 FAM30AQ9NZY2 134 aa7.73□□□□□ -1.17
NEDD4-203ENST00000502612 MED16Q9Y2X0 877 aa7.73□□□□□ -1.17
NEDD4-203ENST00000502612 TMEM233B4DJY2 109 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 NCK2O43639 380 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 ZNF623O75123 536 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 UNC5CO95185 931 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 LDHAP00338 332 aaKnown RBP7.72□□□□□ -1.17
NEDD4-203ENST00000502612 FCER1AP12319 257 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 NHLH2Q02577 135 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 ZNF543Q08ER8 600 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 IFIT5Q13325 482 aaKnown RBP7.72□□□□□ -1.17
NEDD4-203ENST00000502612 KRTAP19-4Q3LI73 84 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 DCAF17Q5H9S7 520 aaPredicted RBP7.72□□□□□ -1.17
NEDD4-203ENST00000502612 C11orf96Q7Z7L8 435 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 SPICE1Q8N0Z3 855 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 ANKRD35Q8N283 1001 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 PDPRQ8NCN5 879 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 KBTBD7Q8WVZ9 684 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 TNIP3Q96KP6 325 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 C20orf173Q96LM9 149 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 RIPOR3Q96MK2 946 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 MNTQ99583 582 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 MYD88Q99836 296 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 BDH2Q9BUT1 245 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 TEX101Q9BY14 249 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 GPR87Q9BY21 358 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 TINAGL1Q9GZM7 467 aaPredicted RBP7.72□□□□□ -1.17
NEDD4-203ENST00000502612 GPR35Q9HC97 309 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 CD248Q9HCU0 757 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 RLIMQ9NVW2 624 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 COL20A1Q9P218 1284 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 ST6GALNAC2Q9UJ37 374 aa7.72□□□□□ -1.17
NEDD4-203ENST00000502612 ISM1B1AKI9 464 aa7.71□□□□□ -1.18
NEDD4-203ENST00000502612 RASA4BC9J798 803 aa7.71□□□□□ -1.18
NEDD4-203ENST00000502612 M0QYG6 137 aa7.71□□□□□ -1.18
NEDD4-203ENST00000502612 BTN3A1O00481 513 aa7.71□□□□□ -1.18
NEDD4-203ENST00000502612 ZNF185O15231 689 aa7.71□□□□□ -1.18
NEDD4-203ENST00000502612 RASA4O43374 803 aa7.71□□□□□ -1.18
NEDD4-203ENST00000502612 TPD52L2O43399 206 aaKnown RBP7.71□□□□□ -1.18
NEDD4-203ENST00000502612 HHEXQ03014 270 aa7.71□□□□□ -1.18
NEDD4-203ENST00000502612 C10orf62Q5T681 223 aaPredicted RBP7.71□□□□□ -1.18
NEDD4-203ENST00000502612 PDSS2Q86YH6 399 aa7.71□□□□□ -1.18
NEDD4-203ENST00000502612 OR6B3Q8NGW1 331 aa7.71□□□□□ -1.18
NEDD4-203ENST00000502612 MARS2Q96GW9 593 aaKnown RBP7.71□□□□□ -1.18
NEDD4-203ENST00000502612 DPH1Q9BZG8 443 aa7.71□□□□□ -1.18
NEDD4-203ENST00000502612 JAG2Q9Y219 1238 aa7.71□□□□□ -1.18
NEDD4-203ENST00000502612 CDYLQ9Y232 598 aa7.71□□□□□ -1.18
NEDD4-203ENST00000502612 AATKQ6ZMQ8 1374 aa7.71□□□□□ -1.18
NEDD4-203ENST00000502612 POM121BA6NF01 834 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 KIF20AO95235 890 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 GNAI2P04899 355 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 ZKSCAN1P17029 563 aaPredicted RBP7.7□□□□□ -1.18
NEDD4-203ENST00000502612 HTR3AP46098 478 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 RNASE9P60153 205 aaKnown RBP7.7□□□□□ -1.18
NEDD4-203ENST00000502612 RPS16P62249 146 aaKnown RBP7.7□□□□□ -1.18
NEDD4-203ENST00000502612 SLC13A2Q13183 592 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 CTBP1Q13363 440 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 OS9Q13438 667 aaPredicted RBP7.7□□□□□ -1.18
NEDD4-203ENST00000502612 METTL24Q5JXM2 366 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 FAM102AQ5T9C2 384 aaPredicted RBP7.7□□□□□ -1.18
NEDD4-203ENST00000502612 KLHDC7AQ5VTJ3 777 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 ZNF783Q6ZMS7 281 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 USP37Q86T82 979 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 GSPT2Q8IYD1 628 aaKnown RBP7.7□□□□□ -1.18
NEDD4-203ENST00000502612 FAM186BQ8IYM0 893 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 NSUN7Q8NE18 718 aaKnown RBP7.7□□□□□ -1.18
NEDD4-203ENST00000502612 SCAMP4Q969E2 229 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 SGCZQ96LD1 299 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 CCDC138Q96M89 665 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 ZSWIM1Q9BR11 485 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 NLRC4Q9NPP4 1024 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 AFF4Q9UHB7 1163 aaKnown RBP7.7□□□□□ -1.18
NEDD4-203ENST00000502612 CLCA2Q9UQC9 943 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 COMMD10Q9Y6G5 202 aa7.7□□□□□ -1.18
NEDD4-203ENST00000502612 TSHRP16473 764 aa7.69□□□□□ -1.18
NEDD4-203ENST00000502612 TNFSF4P23510 183 aa7.69□□□□□ -1.18
NEDD4-203ENST00000502612 MGAT1P26572 445 aa7.69□□□□□ -1.18
NEDD4-203ENST00000502612 HIBADHP31937 336 aaKnown RBP7.69□□□□□ -1.18
NEDD4-203ENST00000502612 TSHZ3Q63HK5 1081 aa7.69□□□□□ -1.18
NEDD4-203ENST00000502612 ZNF585AQ6P3V2 769 aa7.69□□□□□ -1.18
NEDD4-203ENST00000502612 TOGARAM2Q6ZUX3 1019 aa7.69□□□□□ -1.18
NEDD4-203ENST00000502612 HTR3DQ70Z44 454 aa7.69□□□□□ -1.18
NEDD4-203ENST00000502612 MICU3Q86XE3 530 aa7.69□□□□□ -1.18
NEDD4-203ENST00000502612 KRTAP19-1Q8IUB9 90 aa7.69□□□□□ -1.18
NEDD4-203ENST00000502612 OR2C3Q8N628 320 aa7.69□□□□□ -1.18
NEDD4-203ENST00000502612 AOPEPQ8N6M6 819 aa7.69□□□□□ -1.18
NEDD4-203ENST00000502612 FAM46DQ8NEK8 389 aa7.69□□□□□ -1.18
NEDD4-203ENST00000502612 VPS37AQ8NEZ2 397 aa7.69□□□□□ -1.18
NEDD4-203ENST00000502612 ADOQ96SZ5 270 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms