RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-218	ENST00000502357	GAREM2	Q75VX8	874 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	WDR5B	Q86VZ2	330 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	LEMD2	Q8NC56	503 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	WASF1	Q92558	559 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	GTF3C6	Q969F1	213 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	ZNF512	Q96ME7	567 aa	Predicted RBP	13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	TARS2	Q9BW92	718 aa	Known RBP	13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	TMEM134	Q9H6X4	195 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	RALY	Q9UKM9	306 aa	Known RBP	13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	RAB23	Q9ULC3	237 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	YIPF1	Q9Y548	306 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	LAMA1	P25391	3075 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	ARHGEF35	A5YM69	484 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	SLC38A8	A6NNN8	435 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	SPECC1L-ADORA2A	F8WAN1	911 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357		K7ERI5	159 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	MYL4	P12829	197 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	CTH	P32929	405 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	MCM7	P33993	719 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	NPTX2	P47972	431 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	OSTN	P61366	133 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	PPP2R5D	Q14738	602 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	ZBTB6	Q15916	424 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	PLA2G2C	Q5R387	149 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	GPIHBP1	Q8IV16	184 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	MSANTD3	Q96H12	275 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	ZBTB45	Q96K62	511 aa	Predicted RBP	13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	TBC1D32	Q96NH3	1257 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	HAPLN2	Q9GZV7	340 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	SLC38A7	Q9NVC3	462 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	GTSE1	Q9NYZ3	720 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357	PCDHB8	Q9UN66	801 aa		13.86	□□□□□ -0.19
LMNA-218	ENST00000502357		A0A1W2PRU2	124 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	OR4Q2	P0C623	313 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	ZNF806	P0C7X5	589 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	MCF2	P10911	925 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	WEE1	P30291	646 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	SF3A2	Q15428	464 aa	Known RBP	13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	TMEM132A	Q24JP5	1023 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	DGKK	Q5KSL6	1271 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	TTC9B	Q8N6N2	239 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	KIFAP3	Q92845	792 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	E2F7	Q96AV8	911 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	ZFYVE19	Q96K21	471 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	CCDC94	Q9BW85	323 aa	Predicted RBP	13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	GPR88	Q9GZN0	384 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	BHMT2	Q9H2M3	363 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	ASAH2	Q9NR71	780 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	TUBGCP4	Q9UGJ1	667 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	WASF3	Q9UPY6	502 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	ZZEF1	O43149	2961 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	PHLPP2	Q6ZVD8	1323 aa		13.85	□□□□□ -0.19
LMNA-218	ENST00000502357	ATG2B	Q96BY7	2078 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	DENND4C	Q5VZ89	1909 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	EXTL3	O43909	919 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	EPN2	O95208	641 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	LRPAP1	P30533	357 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	YARS	P54577	528 aa	Known RBP	13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	ZNF568	Q3ZCX4	644 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	SEZ6	Q53EL9	994 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	HEATR6	Q6AI08	1181 aa	Known RBP	13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	IQCE	Q6IPM2	695 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	CENPP	Q6IPU0	288 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	ZNF280D	Q6N043	979 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	C1orf228	Q6PIY5	440 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	RALGPS2	Q86X27	583 aa	Predicted RBP	13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	IFT74	Q96LB3	600 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	ACAP3	Q96P50	834 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	NTPCR	Q9BSD7	190 aa	Known RBP	13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	IL21	Q9HBE4	155 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	BRMS1	Q9HCU9	246 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	ANGPTL2	Q9UKU9	493 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	SPEG	Q15772	3267 aa		13.84	□□□□□ -0.19
LMNA-218	ENST00000502357	TSC2	P49815	1807 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	ANK1	P16157	1881 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	FOXD2	O60548	495 aa	Predicted RBP	13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	PRAMEF12	O95522	483 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	OR52Z1	P0C646	297 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	FXR2	P51116	673 aa	Known RBP eCLIP	13.83	□□□□□ -0.2	8e-11	■■■□□ 15.8
LMNA-218	ENST00000502357	PEX3	P56589	373 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	TNK2	Q07912	1038 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	DUSP4	Q13115	394 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	GPR17	Q13304	367 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	LRRC32	Q14392	662 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	PON2	Q15165	354 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	ZNF174	Q15697	407 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	CCDC6	Q16204	474 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	MPZL3	Q6UWV2	235 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	C1orf186	Q6ZWK4	172 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	KCNK18	Q7Z418	384 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	SYNPO	Q8N3V7	929 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	TTC8	Q8TAM2	541 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	LOXL4	Q96JB6	756 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	TMEM209	Q96SK2	561 aa		13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.83	□□□□□ -0.2
LMNA-218	ENST00000502357	MRPL4	Q9BYD3	311 aa	Known RBP	13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms