RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 TRIP11Q15643 1979 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 SYCE3A1L190 88 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 EPOPA6NHQ4 379 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 LRRIQ3A6PVS8 624 aaPredicted RBP13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 C2CD2LO14523 706 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 CYB561D2O14569 222 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 B4GALT3O60512 393 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 ADH1AP07327 375 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 KLRC2P26717 231 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 MTIF2P46199 727 aaKnown RBP13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 ERVFC1P60507 584 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 TNNC1P63316 161 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 DSG1Q02413 1049 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 SKIV2LQ15477 1246 aaKnown RBP13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 PLPP4Q5VZY2 271 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 LMBRD2Q68DH5 695 aaPredicted RBP13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 DPH6Q7L8W6 267 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 SPRED2Q7Z698 418 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 ZC3H3Q8IXZ2 948 aaKnown RBP13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 MICALL1Q8N3F8 863 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 C1orf127Q8N9H9 656 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 OR5B17Q8NGF7 314 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 SENP8Q96LD8 212 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 MMRN2Q9H8L6 949 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 TMEM8AQ9HCN3 771 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 CHST7Q9NS84 486 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 PCDHB8Q9UN66 801 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 MTCH2Q9Y6C9 303 aa13.71□□□□□ -0.21
TMEM39B-209ENST00000498613 CSPG5O95196 566 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 C4BPAP04003 597 aaKnown RBP13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 FAM163BP0C2L3 166 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 TYMPP19971 482 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 FGFR3P22607 806 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 BRCC3P46736 316 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 GCLMP48507 274 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 GUCY2FP51841 1108 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 YWHAHQ04917 246 aaPredicted RBP13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 NCOA4Q13772 614 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 WDR72Q3MJ13 1102 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 ZNF667Q5HYK9 610 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 SV2AQ7L0J3 742 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 TMEM173Q86WV6 379 aaPredicted RBP13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 TMEM86AQ8N2M4 240 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 MMS19Q96T76 1030 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 ZBP1Q9H171 429 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 FNIP2Q9P278 1114 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 CACNG4Q9UBN1 327 aa13.7□□□□□ -0.22
TMEM39B-209ENST00000498613 CHD9Q3L8U1 2897 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 C2orf71A6NGG8 1288 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 M0QZQ0 153 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 FSCN2O14926 492 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 P4HA2O15460 535 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 C1RP00736 705 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 DNAJB1P25685 340 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 EEF1GP26641 437 aaKnown RBP13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 PIK3CAP42336 1068 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 LHX1P48742 406 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 NDUFV1P49821 464 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 ZNF165P49910 485 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 MXI1P50539 228 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 MARSP56192 900 aaKnown RBP13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 MCCD1P59942 119 aaPredicted RBP13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 DLG4P78352 724 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 MYL5Q02045 173 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 PSMD5Q16401 504 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 ZSCAN23Q3MJ62 389 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 ZACNQ401N2 412 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 ANO6Q4KMQ2 910 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 CTXN3Q4LDR2 81 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 KIAA0319Q5VV43 1072 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 OVOS1Q6IE37 1185 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 ZNF280DQ6N043 979 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 EP400NLQ6ZTU2 488 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 RBM23Q86U06 439 aaKnown RBP13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 FBXL13Q8NEE6 735 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 SPATA18Q8TC71 538 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 BCL7CQ8WUZ0 217 aaPredicted RBP13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 PPM1EQ8WY54 764 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 PIK3R5Q8WYR1 880 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 ZNF516Q92618 1163 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 BORCS6Q96GS4 357 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 DNAJC25Q9H1X3 360 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 IGFLR1Q9H665 355 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 GDAP2Q9NXN4 497 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 NFE2L3Q9Y4A8 694 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 SNX9Q9Y5X1 595 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 NLRC5Q86WI3 1866 aa13.69□□□□□ -0.22
TMEM39B-209ENST00000498613 GOLGA6L19H0YKK7 550 aa13.68□□□□□ -0.22
TMEM39B-209ENST00000498613 I3L4J1 428 aa13.68□□□□□ -0.22
TMEM39B-209ENST00000498613 PES1O00541 588 aaKnown RBP13.68□□□□□ -0.22
TMEM39B-209ENST00000498613 STAU1O95793 577 aaKnown RBP13.68□□□□□ -0.22
TMEM39B-209ENST00000498613 CST3P01034 146 aaPredicted RBP13.68□□□□□ -0.22
TMEM39B-209ENST00000498613 AFPP02771 609 aaKnown RBP13.68□□□□□ -0.22
TMEM39B-209ENST00000498613 TRIM49P0CI25 452 aa13.68□□□□□ -0.22
TMEM39B-209ENST00000498613 TRIM49CP0CI26 452 aa13.68□□□□□ -0.22
TMEM39B-209ENST00000498613 ELF1P32519 619 aa13.68□□□□□ -0.22
TMEM39B-209ENST00000498613 NRIP1P48552 1158 aa13.68□□□□□ -0.22
TMEM39B-209ENST00000498613 WNT7BP56706 349 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms