RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 MYL6P60660 151 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 ERVK-21P61565 698 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 NOP14P78316 857 aaKnown RBP18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 TMEM86AQ8N2M4 240 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 TOP6BLQ8N6T0 577 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 APPL2Q8NEU8 664 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 JAKMIP2Q96AA8 810 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 SUSD3Q96L08 255 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 OXCT2Q9BYC2 517 aaPredicted RBP18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 NIF3L1Q9GZT8 377 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 INTS2Q9H0H0 1204 aaKnown RBP18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 PLCB1Q9NQ66 1216 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 SSX2IPQ9Y2D8 614 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 PRG3Q9Y2Y8 225 aaPredicted RBP18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 M0QZQ0 153 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 HUS1O60921 280 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 KIF4AO95239 1232 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 CST3P01034 146 aaPredicted RBP18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 TYMPP19971 482 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 CTNNB1P35222 781 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 GUCY2FP51841 1108 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 NR1I3Q14994 352 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 WDR72Q3MJ13 1102 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 PPP2R2DQ66LE6 453 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 TRIM65Q6PJ69 517 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 DSTYKQ6XUX3 929 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 DDX53Q86TM3 631 aaKnown RBP18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 FMNL3Q8IVF7 1028 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 TRIM5Q9C035 493 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 XYLT2Q9H1B5 865 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 CYP3A43Q9HB55 503 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 IFNKQ9P0W0 207 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 FBXL5Q9UKA1 691 aa18.86■□□□□ 0.61
CTDSP1-215ENST00000498160 LCHNA4D1U4 455 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 GRXCR1A8MXD5 290 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 DNAJB2P25686 324 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 PLCB2Q00722 1185 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 GCNT1Q02742 428 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 CREMQ03060 361 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 FAM109BQ6ICB4 259 aaPredicted RBP18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 FUT10Q6P4F1 479 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 METTL23Q86XA0 190 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 TIFAQ96CG3 184 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 PAAF1Q9BRP4 392 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 NUP58Q9BVL2 599 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 MARCH5Q9NX47 278 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 APEX2Q9UBZ4 518 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 PCDHB8Q9UN66 801 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 NLRC5Q86WI3 1866 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 GBF1Q92538 1859 aa18.85■□□□□ 0.61
CTDSP1-215ENST00000498160 KIAA1671Q9BY89 1806 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 B4GALT3O60512 393 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 LINC00271P0C7V0 271 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 PON1P27169 355 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 MFAP3P55082 362 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 TAP1Q03518 808 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 TRIM14Q14142 442 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 USP41Q3LFD5 358 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 PDE12Q6L8Q7 609 aaKnown RBP18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 NEK11Q8NG66 645 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 LMO3Q8TAP4 145 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 SEMA4DQ92854 862 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 SENP8Q96LD8 212 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 PCMTD1Q96MG8 357 aaPredicted RBP18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 HERC2P3Q9BVR0 1158 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 LMAN2LQ9H0V9 348 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 COLQQ9Y215 455 aaPredicted RBP18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 YBX2Q9Y2T7 364 aaKnown RBP18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 SNX9Q9Y5X1 595 aa18.84■□□□□ 0.61
CTDSP1-215ENST00000498160 ITIH6Q6UXX5 1313 aa18.83■□□□□ 0.61
CTDSP1-215ENST00000498160 TNRC18O15417 2968 aaPredicted RBP18.83■□□□□ 0.61
CTDSP1-215ENST00000498160 RBAK-RBAKDNI3L0D1 243 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 CYB561D2O14569 222 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 PPEF2O14830 753 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 TACC1O75410 805 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 FGF18O76093 207 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 SOD2P04179 222 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 CYP11A1P05108 521 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 MRE11P49959 708 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 SYCP1Q15431 976 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 RNF168Q8IYW5 571 aaPredicted RBP18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 C3orf58Q8NDZ4 430 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 FBXO22Q8NEZ5 403 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 MRFAP1L1Q96HT8 127 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 NAP1L5Q96NT1 182 aaPredicted RBP18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 CRACR2AQ9BSW2 395 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 EDEM3Q9BZQ6 932 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 XPO4Q9C0E2 1151 aaKnown RBP18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 NKX2-4Q9H2Z4 354 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 HCSTQ9UBK5 93 aa18.83■□□□□ 0.6
CTDSP1-215ENST00000498160 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.83■□□□□ 0.65e-7■■■□□ 16
CTDSP1-215ENST00000498160 FSD2A1L4K1 749 aa18.82■□□□□ 0.6
CTDSP1-215ENST00000498160 H7C4K7 107 aa18.82■□□□□ 0.6
CTDSP1-215ENST00000498160 LHX1P48742 406 aa18.82■□□□□ 0.6
CTDSP1-215ENST00000498160 TIGD5Q53EQ6 642 aa18.82■□□□□ 0.6
CTDSP1-215ENST00000498160 FIGNQ5HY92 759 aa18.82■□□□□ 0.6
CTDSP1-215ENST00000498160 ANKS3Q6ZW76 656 aa18.82■□□□□ 0.6
CTDSP1-215ENST00000498160 PPM1KQ8N3J5 372 aa18.82■□□□□ 0.6
CTDSP1-215ENST00000498160 KLHL23Q8NBE8 558 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms