RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RAPGEFL1Q9UHV5 662 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 ZDBF2Q9HCK1 2354 aa16.6■□□□□ 0.25
NUP50-219ENST00000497960 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.6■□□□□ 0.25
NUP50-219ENST00000497960 ARHGEF37A1IGU5 675 aa16.6■□□□□ 0.25
NUP50-219ENST00000497960 PRRG1O14668 218 aa16.6■□□□□ 0.25
NUP50-219ENST00000497960 ACTN4O43707 911 aaKnown RBP16.6■□□□□ 0.25
NUP50-219ENST00000497960 TBC1D4O60343 1298 aa16.6■□□□□ 0.25
NUP50-219ENST00000497960 FSHRP23945 695 aa16.6■□□□□ 0.25
NUP50-219ENST00000497960 AARSP49588 968 aaKnown RBP eCLIP16.6■□□□□ 0.25
NUP50-219ENST00000497960 YWHAHQ04917 246 aaPredicted RBP16.6■□□□□ 0.25
NUP50-219ENST00000497960 FAM160A1Q05DH4 1040 aa16.6■□□□□ 0.25
NUP50-219ENST00000497960 GET4Q7L5D6 327 aaPredicted RBP16.6■□□□□ 0.25
NUP50-219ENST00000497960 BMP8AQ7Z5Y6 402 aa16.6■□□□□ 0.25
NUP50-219ENST00000497960 GRASPQ7Z6J2 395 aaPredicted RBP16.6■□□□□ 0.25
NUP50-219ENST00000497960 TMEM130Q8N3G9 435 aa16.6■□□□□ 0.25
NUP50-219ENST00000497960 OXCT2Q9BYC2 517 aaPredicted RBP16.6■□□□□ 0.25
NUP50-219ENST00000497960 FGFBP2Q9BYJ0 223 aa16.6■□□□□ 0.25
NUP50-219ENST00000497960 IGSF9Q9P2J2 1179 aa16.6■□□□□ 0.25
NUP50-219ENST00000497960 WDR27A2RRH5 827 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 ABLIM3O94929 683 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 OAZ2O95190 189 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 POU2F2P09086 479 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 ATF2P15336 505 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 LILRA4P59901 499 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 FAM26FQ5R3K3 315 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 C9orf57Q5W0N0 161 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 TPGS2Q68CL5 300 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 ARMCX5Q6P1M9 558 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 CRELD2Q6UXH1 353 aaPredicted RBP16.59■□□□□ 0.25
NUP50-219ENST00000497960 NT5DC4Q86YG4 428 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 NOC3LQ8WTT2 800 aaKnown RBP16.59■□□□□ 0.25
NUP50-219ENST00000497960 SAAL1Q96ER3 474 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 CCDC34Q96HJ3 373 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 MYADMQ96S97 322 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 DPP3Q9NY33 737 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 EPS15L1Q9UBC2 864 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 TIMM13Q9Y5L4 95 aaPredicted RBP16.59■□□□□ 0.25
NUP50-219ENST00000497960 DENND4AQ7Z401 1863 aa16.59■□□□□ 0.25
NUP50-219ENST00000497960 PIRO00625 290 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 PPEF2O14830 753 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 KIAA0391O15091 583 aaKnown RBP16.58■□□□□ 0.24
NUP50-219ENST00000497960 EIF3DO15371 548 aaKnown RBP eCLIP16.58■□□□□ 0.24
NUP50-219ENST00000497960 EXTL3O43909 919 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 N4BP1O75113 896 aaKnown RBP16.58■□□□□ 0.24
NUP50-219ENST00000497960 ZNF202O95125 648 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 LRG1P02750 347 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 SLFN14P0C7P3 912 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 CPB1P15086 417 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 TYMPP19971 482 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 AFMP43652 599 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 TDGQ13569 410 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 UNC13DQ70J99 1090 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 BRSK2Q8IWQ3 736 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 SUGP1Q8IWZ8 645 aaKnown RBP16.58■□□□□ 0.24
NUP50-219ENST00000497960 CACTINQ8WUQ7 758 aaKnown RBP16.58■□□□□ 0.24
NUP50-219ENST00000497960 HPS3Q969F9 1004 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 CBWD1Q9BRT8 395 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 BLZF1Q9H2G9 400 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 KCNK12Q9HB15 430 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 CYP4F11Q9HBI6 524 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 RBAKQ9NYW8 714 aaPredicted RBP16.58■□□□□ 0.24
NUP50-219ENST00000497960 AFF4Q9UHB7 1163 aaKnown RBP16.58■□□□□ 0.24
NUP50-219ENST00000497960 MAFFQ9ULX9 164 aa16.58■□□□□ 0.24
NUP50-219ENST00000497960 ZFP37Q9Y6Q3 630 aaPredicted RBP16.58■□□□□ 0.24
NUP50-219ENST00000497960 DOCK6Q96HP0 2047 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 PVALEFA0A1B0GWK0 134 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 ANO9A1A5B4 782 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 GOLGA8IPA6NC78 632 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 OR6C75A6NL08 312 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 GOLGA8JA6NMD2 632 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 KINO60870 393 aaKnown RBP16.57■□□□□ 0.24
NUP50-219ENST00000497960 ODC1P11926 461 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 LAMP2P13473 410 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 TAF6P49848 677 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 NTHL1P78549 312 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 TFAMQ00059 246 aaKnown RBP16.57■□□□□ 0.24
NUP50-219ENST00000497960 OVOS1Q6IE37 1185 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 KRBA2Q6ZNG9 492 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 TCEAL8Q8IYN2 117 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 GRAMD1CQ8IYS0 662 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 FMR1NBQ8N0W7 255 aaPredicted RBP16.57■□□□□ 0.24
NUP50-219ENST00000497960 GPD1LQ8N335 351 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 NXPE3Q969Y0 559 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 ASIC4Q96FT7 647 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 SENP8Q96LD8 212 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 PCIF1Q9H4Z3 704 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 DSEQ9UL01 958 aa16.57■□□□□ 0.24
NUP50-219ENST00000497960 ARIH1Q9Y4X5 557 aaPredicted RBP16.57■□□□□ 0.24
NUP50-219ENST00000497960 UBE4BO95155 1302 aa16.56■□□□□ 0.24
NUP50-219ENST00000497960 ADCY1Q08828 1119 aa16.56■□□□□ 0.24
NUP50-219ENST00000497960 PABPC1LQ4VXU2 614 aaKnown RBP16.56■□□□□ 0.24
NUP50-219ENST00000497960 METTL23Q86XA0 190 aa16.56■□□□□ 0.24
NUP50-219ENST00000497960 EFCAB13Q8IY85 973 aa16.56■□□□□ 0.24
NUP50-219ENST00000497960 ELMOD1Q8N336 334 aa16.56■□□□□ 0.24
NUP50-219ENST00000497960 FBXL6Q8N531 539 aa16.56■□□□□ 0.24
NUP50-219ENST00000497960 GLIS3Q8NEA6 775 aa16.56■□□□□ 0.24
NUP50-219ENST00000497960 ZSWIM2Q8NEG5 633 aa16.56■□□□□ 0.24
NUP50-219ENST00000497960 ZNF507Q8TCN5 953 aa16.56■□□□□ 0.24
NUP50-219ENST00000497960 ZNF560Q96MR9 790 aa16.56■□□□□ 0.24
NUP50-219ENST00000497960 DNMT3BQ9UBC3 853 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms