RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 AARSP49588 968 aaKnown RBP eCLIP12.4□□□□□ -0.42
HLA-B-254ENST00000497377 KCNQ1P51787 676 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 PNOCQ13519 176 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 PSMD5Q16401 504 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 SNRNP35Q16560 246 aaKnown RBP12.4□□□□□ -0.42
HLA-B-254ENST00000497377 RTP2Q5QGT7 225 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 PTCRAQ6ISU1 281 aaPredicted RBP12.4□□□□□ -0.42
HLA-B-254ENST00000497377 LLGL2Q6P1M3 1020 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 SPATA20Q8TB22 786 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 LNX1Q8TBB1 728 aaPredicted RBP12.4□□□□□ -0.42
HLA-B-254ENST00000497377 NOC3LQ8WTT2 800 aaKnown RBP12.4□□□□□ -0.42
HLA-B-254ENST00000497377 SMARCE1Q969G3 411 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 ZDHHC16Q969W1 377 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 OXCT2Q9BYC2 517 aaPredicted RBP12.4□□□□□ -0.42
HLA-B-254ENST00000497377 KCTD10Q9H3F6 313 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 DPP3Q9NY33 737 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 MTRRQ9UBK8 725 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 BACE2Q9Y5Z0 518 aa12.4□□□□□ -0.42
HLA-B-254ENST00000497377 MTCL1Q9Y4B5 1905 aaKnown RBP12.39□□□□□ -0.43
HLA-B-254ENST00000497377 H7C4K7 107 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 M0QZQ0 153 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 PIRO00625 290 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 CLIC2O15247 247 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 MBTPS2O43462 519 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 CALUO43852 315 aaPredicted RBP12.39□□□□□ -0.43
HLA-B-254ENST00000497377 GADD45BO75293 160 aaPredicted RBP12.39□□□□□ -0.43
HLA-B-254ENST00000497377 PRPF40AO75400 957 aaKnown RBP12.39□□□□□ -0.43
HLA-B-254ENST00000497377 TKTP29401 623 aaKnown RBP12.39□□□□□ -0.43
HLA-B-254ENST00000497377 PNPLA4P41247 253 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 BRCC3P46736 316 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 CYP2J2P51589 502 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 ITIH3Q06033 890 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 NFIL3Q16649 462 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 COBLL1Q53SF7 1204 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 ZNF658Q5TYW1 1059 aaPredicted RBP12.39□□□□□ -0.43
HLA-B-254ENST00000497377 C9orf57Q5W0N0 161 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 PRSS55Q6UWB4 352 aaPredicted RBP12.39□□□□□ -0.43
HLA-B-254ENST00000497377 CBWD2Q8IUF1 395 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 EFCAB13Q8IY85 973 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 ZSWIM2Q8NEG5 633 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 ANKRD36BP1Q96IX9 119 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 B3GALT6Q96L58 329 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 PLEKHA4Q9H4M7 779 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 PDE11AQ9HCR9 933 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 PRKAG3Q9UGI9 489 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 ITGA11Q9UKX5 1188 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 TRAF3IP3Q9Y228 551 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 PCDHA5Q9Y5H7 936 aa12.39□□□□□ -0.43
HLA-B-254ENST00000497377 EXOC3O60645 756 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 TMEM191BP0C7N4 346 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 EPCAMP16422 314 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 IGFBP6P24592 240 aaPredicted RBP12.38□□□□□ -0.43
HLA-B-254ENST00000497377 RPL13P26373 211 aaKnown RBP12.38□□□□□ -0.43
HLA-B-254ENST00000497377 PPP1R2P41236 205 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 GUCY2FP51841 1108 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 LILRA4P59901 499 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 RBM10P98175 930 aaKnown RBP12.38□□□□□ -0.43
HLA-B-254ENST00000497377 TFAMQ00059 246 aaKnown RBP12.38□□□□□ -0.43
HLA-B-254ENST00000497377 RAB33AQ14088 237 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 MRPL58Q14197 206 aaKnown RBP12.38□□□□□ -0.43
HLA-B-254ENST00000497377 PSMD6Q15008 389 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 SMAD2Q15796 467 aaKnown RBP12.38□□□□□ -0.43
HLA-B-254ENST00000497377 DUOXA2Q1HG44 320 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 CES5AQ6NT32 575 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 SYCE2Q6PIF2 218 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 CYP26C1Q6V0L0 522 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 DSTYKQ6XUX3 929 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 RTL10Q7L3V2 364 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 WDR49Q8IV35 697 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 LRRC52Q8N7C0 313 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 ZNF560Q96MR9 790 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 GBP4Q96PP9 640 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 FNBP1Q96RU3 617 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 CLSTN3Q9BQT9 956 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 S1PR5Q9H228 398 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 ADAM7Q9H2U9 754 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 SFXN1Q9H9B4 322 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 TSHZ2Q9NRE2 1034 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 INTS13Q9NVM9 706 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 DMAC2Q9NW81 257 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 PLA2G2EQ9NZK7 142 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 DSEQ9UL01 958 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 R3HCC1Q9Y3T6 440 aaKnown RBP12.38□□□□□ -0.43
HLA-B-254ENST00000497377 PLXNA3P51805 1871 aa12.38□□□□□ -0.43
HLA-B-254ENST00000497377 I3L4J1 428 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 TNNC2P02585 160 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 NR3C1P04150 777 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 ODC1P11926 461 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 TYMPP19971 482 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 TAF6P49848 677 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 WNT7BP56706 349 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 YWHAHQ04917 246 aaPredicted RBP12.37□□□□□ -0.43
HLA-B-254ENST00000497377 CYP24A1Q07973 514 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 CLUL1Q15846 466 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 SV2CQ496J9 727 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 SLC8B1Q6J4K2 584 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 ZNF280DQ6N043 979 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 LILRA6Q6PI73 481 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 USP37Q86T82 979 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 C1orf127Q8N9H9 656 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms