RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 NOMO2Q5JPE7 1267 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 ZNF385CQ66K41 422 aaPredicted RBP6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 ZC3H14Q6PJT7 736 aaKnown RBP6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 C15orf39Q6ZRI6 1047 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 CATSPER4Q7RTX7 472 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 MIER3Q7Z3K6 550 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 DDX53Q86TM3 631 aaKnown RBP6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 RHPN2Q8IUC4 686 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 SULF2Q8IWU5 870 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 LINC01465Q8N7H1 131 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 CRYGNQ8WXF5 182 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 KLHDC7BQ96G42 594 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 INTS4Q96HW7 963 aaKnown RBP6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 ZNF668Q96K58 619 aaPredicted RBP6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 NLRP4Q96MN2 994 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 TMEM74Q96NL1 305 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 NAP1L5Q96NT1 182 aaPredicted RBP6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 PPP1R9BQ96SB3 815 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 RNF26Q9BY78 433 aaPredicted RBP6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 GBP3Q9H0R5 595 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 CYP26B1Q9NR63 512 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 TBC1D13Q9NVG8 400 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 CDH22Q9UJ99 828 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 DUSP12Q9UNI6 340 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 SSX2IPQ9Y2D8 614 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 IRAK3Q9Y616 596 aa6.4□□□□□ -1.38
CACNA1C-229ENST00000496818 CNTNAP2Q9UHC6 1331 aa6.4□□□□□ -1.39
CACNA1C-229ENST00000496818 TRANK1O15050 2925 aa6.4□□□□□ -1.39
CACNA1C-229ENST00000496818 MYH6P13533 1939 aa6.4□□□□□ -1.39
CACNA1C-229ENST00000496818 NT5C1B-RDH14C9J2C7 533 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 DDX3YO15523 660 aaKnown RBP6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 ERLIN2O94905 339 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 ECEL1O95672 775 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 WEE2P0C1S8 567 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 EPCAMP16422 314 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 TFE3P19532 575 aaPredicted RBP6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 AOC1P19801 751 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 NME2P22392 152 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 KLRC2P26717 231 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 EIF4A3P38919 411 aaKnown RBP6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 ARL4DP49703 201 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 NLRP5P59047 1200 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 TDGQ13569 410 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 PTPN14Q15678 1187 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 UGCGQ16739 394 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 XKR3Q5GH77 459 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 CWF19L1Q69YN2 538 aaKnown RBP6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 BLOC1S2Q6QNY1 142 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 TMC5Q6UXY8 1006 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 ASCL5Q7RTU5 278 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 ZSCAN30Q86W11 494 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 TMEM173Q86WV6 379 aaPredicted RBP6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 EXOC8Q8IYI6 725 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 HACE1Q8IYU2 909 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 PHC3Q8NDX5 983 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 KCNB2Q92953 911 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 BRF1Q92994 677 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 IGSF21Q96ID5 467 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 RTP3Q9BQQ7 232 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 TMEM175Q9BSA9 504 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 SPON2Q9BUD6 331 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 SLC26A6Q9BXS9 759 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 UNC45AQ9H3U1 944 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 RSAD1Q9HA92 442 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 RRAGDQ9NQL2 400 aaPredicted RBP6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 MRPL17Q9NRX2 175 aaKnown RBP6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 AGPAT5Q9NUQ2 364 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 IGSF9Q9P2J2 1179 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 ADAMTS1Q9UHI8 967 aa6.39□□□□□ -1.39
CACNA1C-229ENST00000496818 A0A087WZ62 844 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 CPLX1O14810 134 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 MSH4O15457 936 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 PRPF3O43395 683 aaKnown RBP6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 GAS2O43903 313 aaKnown RBP6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 ZNF862O60290 1169 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 GLUD1P00367 558 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 SSBP05455 408 aaKnown RBP eCLIP6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 GALTP07902 379 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 NID1P14543 1247 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 DNAJA1P31689 397 aaKnown RBP6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 HSPA4P34932 840 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 ID4P47928 161 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 SLC11A1P49279 550 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 USP11P51784 963 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 NEK4P51957 841 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 AK2P54819 239 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 NLRP12P59046 1061 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 PSMC5P62195 406 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 SNRPNP63162 240 aaKnown RBP6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 EXOSC10Q01780 885 aaKnown RBP6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 CREMQ03060 361 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 C19orf57Q0VDD7 668 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 CAMK2GQ13555 558 aaPredicted RBP6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 PWP1Q13610 501 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 COL9A3Q14050 684 aaPredicted RBP6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 SEPT6Q14141 434 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 ANGPT1Q15389 498 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 LETM2Q2VYF4 491 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 ADCK5Q3MIX3 580 aa6.38□□□□□ -1.39
CACNA1C-229ENST00000496818 LONRF3Q496Y0 759 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms