RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 DLG4P78352 724 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 FKBP3Q00688 224 aaKnown RBP12.87□□□□□ -0.35
APTX-233ENST00000496030 SIGLEC14Q08ET2 396 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 PAK1Q13153 545 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 ADAM15Q13444 863 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 STIM1Q13586 685 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 CBX2Q14781 532 aaPredicted RBP12.87□□□□□ -0.35
APTX-233ENST00000496030 CEP135Q66GS9 1140 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 LMBRD2Q68DH5 695 aaPredicted RBP12.87□□□□□ -0.35
APTX-233ENST00000496030 DDX53Q86TM3 631 aaKnown RBP12.87□□□□□ -0.35
APTX-233ENST00000496030 NT5DC4Q86YG4 428 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 CCDC127Q96BQ5 260 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 DDX27Q96GQ7 796 aaKnown RBP12.87□□□□□ -0.35
APTX-233ENST00000496030 UROC1Q96N76 676 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 COLEC11Q9BWP8 271 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 GPR62Q9BZJ7 368 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 INTS13Q9NVM9 706 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 DPP3Q9NY33 737 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 CLEC1BQ9P126 229 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 RWDD2AQ9UIY3 292 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 CTNND2Q9UQB3 1225 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 LZTS1Q9Y250 596 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 CARNS1A5YM72 827 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 LRRIQ3A6PVS8 624 aaPredicted RBP12.86□□□□□ -0.35
APTX-233ENST00000496030 PODXLO00592 558 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 FSCN2O14926 492 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 CETN3O15182 167 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 PSMC2P35998 433 aaKnown RBP12.86□□□□□ -0.35
APTX-233ENST00000496030 UBE3AQ05086 875 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 SURF1Q15526 300 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 C9orf57Q5W0N0 161 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 IRF2BP1Q8IU81 584 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 C1orf127Q8N9H9 656 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 TMC2Q8TDI7 906 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 POF1BQ8WVV4 589 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 TSG101Q99816 390 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 MKNK1Q9BUB5 465 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 SIX4Q9UIU6 781 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 ADAM28Q9UKQ2 775 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 PCDHGC5Q9Y5F6 944 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 VWA8A3KMH1 1905 aa12.86□□□□□ -0.35
APTX-233ENST00000496030 DNAH14Q0VDD8 3507 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 BICDL2A1A5D9 508 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 SPTLC1O15269 473 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 LILRB3O75022 631 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 B3GAT3O94766 335 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 DLATP10515 647 aaKnown RBP12.85□□□□□ -0.35
APTX-233ENST00000496030 ERCC5P28715 1186 aaPredicted RBP12.85□□□□□ -0.35
APTX-233ENST00000496030 AARSP49588 968 aaKnown RBP eCLIP12.85□□□□□ -0.35
APTX-233ENST00000496030 NDUFV1P49821 464 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 TFAMQ00059 246 aaKnown RBP12.85□□□□□ -0.35
APTX-233ENST00000496030 KRT17Q04695 432 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 ENPEPQ07075 957 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 SKOR2Q2VWA4 1001 aaPredicted RBP12.85□□□□□ -0.35
APTX-233ENST00000496030 C15orf39Q6ZRI6 1047 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 FILIP1Q7Z7B0 1213 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 ADGRD2Q7Z7M1 963 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 WDR49Q8IV35 697 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 FAM186BQ8IYM0 893 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 SMRP1Q8NCR6 262 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 BEST2Q8NFU1 509 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 HASPINQ8TF76 798 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 TMEM169Q96HH4 297 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 CEP63Q96MT8 703 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 CGRRF1Q99675 332 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 FUCA2Q9BTY2 467 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 MTMR12Q9C0I1 747 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 LMAN2LQ9H0V9 348 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 CHST7Q9NS84 486 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 FRMD4BQ9Y2L6 1034 aa12.85□□□□□ -0.35
APTX-233ENST00000496030 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.85□□□□□ -0.35
APTX-233ENST00000496030 KMT2BQ9UMN6 2715 aaPredicted RBP12.85□□□□□ -0.35
APTX-233ENST00000496030 NCOR2Q9Y618 2525 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 I3L4J1 428 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 IKBKBO14920 756 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 SLC16A3O15427 465 aaKnown RBP12.84□□□□□ -0.35
APTX-233ENST00000496030 XPOTO43592 962 aaKnown RBP12.84□□□□□ -0.35
APTX-233ENST00000496030 TADA2AO75478 443 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 CST3P01034 146 aaPredicted RBP12.84□□□□□ -0.35
APTX-233ENST00000496030 C4BPAP04003 597 aaKnown RBP12.84□□□□□ -0.35
APTX-233ENST00000496030 SOD2P04179 222 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 BRCC3P46736 316 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 ID4P47928 161 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 VAMP7P51809 220 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 LILRA4P59901 499 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 PPP3CAQ08209 521 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 DUOXA2Q1HG44 320 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 CT47A1Q5JQC4 288 aaPredicted RBP12.84□□□□□ -0.35
APTX-233ENST00000496030 KIAA0319Q5VV43 1072 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 FUT10Q6P4F1 479 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 C11orf57Q6ZUT1 292 aaPredicted RBP12.84□□□□□ -0.35
APTX-233ENST00000496030 INTS8Q75QN2 995 aaKnown RBP12.84□□□□□ -0.35
APTX-233ENST00000496030 TRAPPC11Q7Z392 1133 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 VPS52Q8N1B4 723 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 CSGALNACT2Q8N6G5 542 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 CACTINQ8WUQ7 758 aaKnown RBP12.84□□□□□ -0.35
APTX-233ENST00000496030 B3GALT6Q96L58 329 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 SRRTQ9BXP5 876 aaKnown RBP12.84□□□□□ -0.35
APTX-233ENST00000496030 ZBP1Q9H171 429 aa12.84□□□□□ -0.35
APTX-233ENST00000496030 IRF2BPLQ9H1B7 796 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms