RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 VPS41P49754 854 aa9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 CAPSQ13938 189 aa9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 TRIP13Q15645 432 aaPredicted RBP9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 GPR162Q16538 588 aa9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 WLSQ5T9L3 541 aa9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 TDRD10Q5VZ19 366 aaKnown RBP9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 TRPM8Q7Z2W7 1104 aa9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 CCDC63Q8NA47 563 aa9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 N4BP2L2Q92802 583 aaPredicted RBP9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 CDHR1Q96JP9 859 aa9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 IWS1Q96ST2 819 aa9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 DDX23Q9BUQ8 820 aaKnown RBP9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 HEMGNQ9BXL5 484 aa9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 ABCF3Q9NUQ8 709 aa9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 DNAJC17Q9NVM6 304 aaKnown RBP9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 MAP3K20Q9NYL2 800 aaKnown RBP9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 NXF1Q9UBU9 619 aaKnown RBP9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 PARP2Q9UGN5 583 aa9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 MTUS1Q9ULD2 1270 aa9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 BRCA1P38398 1863 aaKnown RBP9.68□□□□□ -0.86
TM9SF4-207ENST00000495749 FOXO6A8MYZ6 492 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 O00370 1275 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 MAFGO15525 162 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 FDX1P10109 184 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 RARGP13631 454 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 PDE6CP51160 858 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 FMO1Q01740 532 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 CALCOCO2Q13137 446 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 SLMAPQ14BN4 828 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 SLC13A5Q86YT5 568 aaPredicted RBP9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 C11orf70Q9BRQ4 267 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 TMEM8AQ9HCN3 771 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 PCDHB4Q9Y5E5 795 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 DOCK5Q9H7D0 1870 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 UBE4BO95155 1302 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 PASKQ96RG2 1323 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 CLDN3O15551 220 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 RTN2O75298 545 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 HADHBP55084 474 aaKnown RBP9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 ITIH4Q14624 930 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 CNGA2Q16280 664 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 WDR44Q5JSH3 913 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 EXOC3L1Q86VI1 746 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 TMEM192Q8IY95 271 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 KCTD17Q8N5Z5 321 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 ZNF564Q8TBZ8 553 aaPredicted RBP9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 C1orf54Q8WWF1 131 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 ACSF2Q96CM8 615 aaPredicted RBP9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 RPS6KC1Q96S38 1066 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 RNPEPQ9H4A4 650 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 NOD2Q9HC29 1040 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 C1orf112Q9NSG2 853 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 SLC12A4Q9UP95 1085 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 LTBP3Q9NS15 1303 aa9.67□□□□□ -0.86
TM9SF4-207ENST00000495749 PIK3R2O00459 728 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 ATP6V1G2O95670 118 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 RFX1P22670 979 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 RRM1P23921 792 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 GBP1P32455 592 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 ELF1P32519 619 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 EPHX2P34913 555 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 OAZ1P54368 228 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 GHRHRQ02643 423 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 BRDTQ58F21 947 aaPredicted RBP9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 DPY19L2Q6NUT2 758 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 TAOK1Q7L7X3 1001 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 FAM71AQ8IYT1 594 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 ANKRD42Q8N9B4 389 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 CHST13Q8NET6 341 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 SEPT1Q8WYJ6 367 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 ARHGEF2Q92974 986 aaKnown RBP9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 ART4Q93070 314 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 SLC10A4Q96EP9 437 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 MMP19Q99542 508 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 MTMR12Q9C0I1 747 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 STMN4Q9H169 189 aaPredicted RBP9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 WNT8AQ9H1J5 351 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 CDC42EP4Q9H3Q1 356 aaKnown RBP9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 APOBEC3GQ9HC16 384 aaKnown RBP9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 FGFR1OP2Q9NVK5 253 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 AGAP1Q9UPQ3 857 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 TCP11X1B4DZS4 312 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 HGSO14964 777 aaPredicted RBP9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 ECEL1O95672 775 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 RPSAP08865 295 aaKnown RBP9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 ZNF286BP0CG31 522 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 SLC8A1P32418 973 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 GJA5P36382 358 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 ALCAMQ13740 583 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 CRELD2Q6UXH1 353 aaPredicted RBP9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 ERO1BQ86YB8 467 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 ANKRD13AQ8IZ07 590 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 NSRP1Q9H0G5 558 aaKnown RBP9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 KCNK9Q9NPC2 374 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 PDLIM7Q9NR12 457 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 NRBP2Q9NSY0 501 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 ARHGAP28Q9P2N2 729 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 CTNNAL1Q9UBT7 734 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 ANAPC7Q9UJX3 599 aa9.66□□□□□ -0.86
TM9SF4-207ENST00000495749 NOCTQ9UK39 431 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms