RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 SSBP4Q9BWG4 385 aaPredicted RBP11.06□□□□□ -0.64
RAB11FIP3-211ENST00000495663 FGFBP2Q9BYJ0 223 aa11.06□□□□□ -0.64
RAB11FIP3-211ENST00000495663 MTIF3Q9H2K0 278 aaKnown RBP11.06□□□□□ -0.64
RAB11FIP3-211ENST00000495663 TMX1Q9H3N1 280 aa11.06□□□□□ -0.64
RAB11FIP3-211ENST00000495663 TMEM206Q9H813 350 aa11.06□□□□□ -0.64
RAB11FIP3-211ENST00000495663 EXOC7Q9UPT5 735 aa11.06□□□□□ -0.64
RAB11FIP3-211ENST00000495663 UBE4BO95155 1302 aa11.06□□□□□ -0.64
RAB11FIP3-211ENST00000495663 A0A1B0GUA9 196 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 HNRNPDLO14979 420 aaKnown RBP11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 MGEA5O60502 916 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 PRPF6O94906 941 aaKnown RBP11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 PIGRP01833 764 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 EDN1P05305 212 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 HOXA11P31270 313 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 KCNJ6P48051 423 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 LIG4P49917 911 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 DSC3Q14574 896 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 NAA30Q147X3 362 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 TCTN1Q2MV58 587 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 CCDC183Q5T5S1 534 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 ATF7IP2Q5U623 682 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 C16orf46Q6P387 395 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 SLC27A1Q6PCB7 646 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 ZPBP2Q6X784 338 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 EPM2AIP1Q7L775 607 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 OTOP2Q7RTS6 562 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 APBB1IPQ7Z5R6 666 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 SYCP3Q8IZU3 236 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 TRIML1Q8N9V2 468 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 KIAA0895Q8NCT3 520 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 GLIS3Q8NEA6 775 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 ZNF507Q8TCN5 953 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 TTC9Q92623 222 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 ACO2Q99798 780 aaKnown RBP11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 ADPGKQ9BRR6 497 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 TARS2Q9BW92 718 aaKnown RBP11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 RGS18Q9NS28 235 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 C1orf112Q9NSG2 853 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 MAN1B1Q9UKM7 699 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 TNFSF13BQ9Y275 285 aa11.05□□□□□ -0.64
RAB11FIP3-211ENST00000495663 RBAK-RBAKDNI3L0D1 243 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 ENPP3O14638 875 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 TOM1L1O75674 476 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 BMP8BP34820 402 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 RAB27AP51159 221 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 KCNA1Q09470 495 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 BMT2Q1RMZ1 405 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 DCAF4L1Q3SXM0 396 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 ISM2Q6H9L7 571 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 CAVIN1Q6NZI2 390 aaKnown RBP11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 SLC24A5Q71RS6 500 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 RTN4RL1Q86UN2 441 aaPredicted RBP11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 CDR2LQ86X02 465 aaPredicted RBP11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 MYOCDQ8IZQ8 938 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 SCFD1Q8WVM8 642 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 LINC01599Q8WXQ3 324 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 HERVK_113Q902F9 699 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 TCHPQ9BT92 498 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 TRAIPQ9BWF2 469 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 TRIM6Q9C030 488 aaPredicted RBP11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 PDZD7Q9H5P4 517 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 TMEM63CQ9P1W3 806 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 GDAQ9Y2T3 454 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 TTC3P53804 2025 aa11.04□□□□□ -0.64
RAB11FIP3-211ENST00000495663 CITO14578 2027 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 A0A0U1RQF3 1178 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 C9IYK1 514 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 BIN1O00499 593 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 CLDN3O15551 220 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 NPTXRO95502 500 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 GHRHP01286 108 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 AMHP03971 560 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 PPP1R2P41236 205 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 MATR3P43243 847 aaKnown RBP eCLIP11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 WDR5P61964 334 aaKnown RBP11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 STIM1Q13586 685 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 MORC3Q14149 939 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 KNOP1Q1ED39 458 aaKnown RBP11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 ZNF568Q3ZCX4 644 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 COBLL1Q53SF7 1204 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 SLFN12LQ6IEE8 588 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 MPZL3Q6UWV2 235 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 RBM43Q6ZSC3 357 aaKnown RBP11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 NELFCDQ8IXH7 590 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 SMYD4Q8IYR2 804 aaPredicted RBP11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 GUF1Q8N442 669 aaKnown RBP11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 RNPC3Q96LT9 517 aaKnown RBP11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 GBP3Q9H0R5 595 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 PTPRHQ9HD43 1115 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 FAM105AQ9NUU6 356 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 ANKFY1Q9P2R3 1169 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 MAPK8IP1Q9UQF2 711 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 SLC4A7Q9Y6M7 1214 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 GBF1Q92538 1859 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 ZMYM2Q9UBW7 1377 aa11.03□□□□□ -0.64
RAB11FIP3-211ENST00000495663 CEP290O15078 2479 aa11.02□□□□□ -0.64
RAB11FIP3-211ENST00000495663 RALGAPA2Q2PPJ7 1873 aa11.02□□□□□ -0.64
RAB11FIP3-211ENST00000495663 FNDC1Q4ZHG4 1894 aaPredicted RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms