RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 NIF3L1Q9GZT8 377 aa16.83■□□□□ 0.28
PHF1-211ENST00000495509 SDCBP2Q9H190 292 aa16.83■□□□□ 0.28
PHF1-211ENST00000495509 TBC1D13Q9NVG8 400 aa16.83■□□□□ 0.28
PHF1-211ENST00000495509 AIPL1Q9NZN9 384 aa16.83■□□□□ 0.28
PHF1-211ENST00000495509 HCSTQ9UBK5 93 aa16.83■□□□□ 0.28
PHF1-211ENST00000495509 FNDC1Q4ZHG4 1894 aaPredicted RBP16.83■□□□□ 0.28
PHF1-211ENST00000495509 CALCAP01258 141 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 ACO1P21399 889 aaKnown RBP16.82■□□□□ 0.28
PHF1-211ENST00000495509 USP8P40818 1118 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 STAT1P42224 750 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 RAP1GAPP47736 663 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 FPGSQ05932 587 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 HGSNATQ68CP4 663 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 ZNF365Q70YC5 407 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 LRRC52Q8N7C0 313 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 SMYD3Q9H7B4 428 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 VRTNQ9H8Y1 702 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 ACP6Q9NPH0 428 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 RRAGDQ9NQL2 400 aaPredicted RBP16.82■□□□□ 0.28
PHF1-211ENST00000495509 MYO6Q9UM54 1294 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 SOWAHDA6NJG2 315 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 ESPNB1AK53 854 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 F8W810 466 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 STAU1O95793 577 aaKnown RBP16.82■□□□□ 0.28
PHF1-211ENST00000495509 CD58P19256 250 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 FECHP22830 423 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 WDR5P61964 334 aaKnown RBP16.82■□□□□ 0.28
PHF1-211ENST00000495509 MYO1EQ12965 1108 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 MTF1Q14872 753 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 MEA1Q16626 185 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 HS1BP3Q53T59 392 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 FAM117BQ6P1L5 589 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 C3orf58Q8NDZ4 430 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 URGCPQ8TCY9 931 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 SYN2Q92777 582 aaPredicted RBP16.82■□□□□ 0.28
PHF1-211ENST00000495509 NUCKS1Q9H1E3 243 aaKnown RBP16.82■□□□□ 0.28
PHF1-211ENST00000495509 ARHGAP20Q9P2F6 1191 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 DAAM1Q9Y4D1 1078 aa16.82■□□□□ 0.28
PHF1-211ENST00000495509 TBKBP1A7MCY6 615 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 PODXLO00592 558 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 CYP26A1O43174 497 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 PFKMP08237 780 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 TBXAS1P24557 533 aaPredicted RBP16.81■□□□□ 0.28
PHF1-211ENST00000495509 LILRA4P59901 499 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 PPIGQ13427 754 aaKnown RBP eCLIP16.81■□□□□ 0.289e-8■■■■■ 29.2
PHF1-211ENST00000495509 TUSC3Q13454 348 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 ASIC2Q16515 512 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 UPP1Q16831 310 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 ENOSF1Q7L5Y1 443 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 FAM71AQ8IYT1 594 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 ABI1Q8IZP0 508 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 TOP1MTQ969P6 601 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 MMS19Q96T76 1030 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 BCO2Q9BYV7 579 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 ZNHIT6Q9NWK9 470 aaKnown RBP16.81■□□□□ 0.28
PHF1-211ENST00000495509 DNAJB4Q9UDY4 337 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 SNX9Q9Y5X1 595 aa16.81■□□□□ 0.28
PHF1-211ENST00000495509 LAMA2P24043 3122 aaKnown RBP16.81■□□□□ 0.28
PHF1-211ENST00000495509 KPNA7A9QM74 516 aa16.8■□□□□ 0.28
PHF1-211ENST00000495509 FGBP02675 491 aa16.8■□□□□ 0.28
PHF1-211ENST00000495509 CLCN1P35523 988 aa16.8■□□□□ 0.28
PHF1-211ENST00000495509 RNASELQ05823 741 aaKnown RBP16.8■□□□□ 0.28
PHF1-211ENST00000495509 DSC1Q08554 894 aa16.8■□□□□ 0.28
PHF1-211ENST00000495509 PAN2Q504Q3 1202 aaKnown RBP16.8■□□□□ 0.28
PHF1-211ENST00000495509 TMEM240Q5SV17 173 aa16.8■□□□□ 0.28
PHF1-211ENST00000495509 RAD9BQ6WBX8 426 aa16.8■□□□□ 0.28
PHF1-211ENST00000495509 UBR7Q8N806 425 aa16.8■□□□□ 0.28
PHF1-211ENST00000495509 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.8■□□□□ 0.284e-8■■■■□ 21.2
PHF1-211ENST00000495509 CISHQ9NSE2 258 aa16.8■□□□□ 0.28
PHF1-211ENST00000495509 KANSL3Q9P2N6 904 aa16.8■□□□□ 0.28
PHF1-211ENST00000495509 PYCARDQ9ULZ3 195 aa16.8■□□□□ 0.28
PHF1-211ENST00000495509 PCDHB4Q9Y5E5 795 aa16.8■□□□□ 0.28
PHF1-211ENST00000495509 PTPRSQ13332 1948 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 DGKIO75912 1065 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 ITGB1P05556 798 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 KRT5P13647 590 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 RPL9P32969 192 aaKnown RBP16.79■□□□□ 0.28
PHF1-211ENST00000495509 TAF6P49848 677 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 TNNC1P63316 161 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 TMEM270Q6UE05 265 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 CD300LGQ6UXG3 332 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 CYP26C1Q6V0L0 522 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 COLGALT2Q8IYK4 626 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 TNS4Q8IZW8 715 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 FAM81BQ96LP2 452 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 HAUS4Q9H6D7 363 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 NRDE2Q9H7Z3 1164 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.79■□□□□ 0.28
PHF1-211ENST00000495509 ZBBXA8MT70 800 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 B3GAT3O94766 335 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 AMHP03971 560 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 SERPING1P05155 500 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 FERP16591 822 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 EIF4A3P38919 411 aaKnown RBP16.79■□□□□ 0.28
PHF1-211ENST00000495509 PTK2Q05397 1052 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 KLHL30Q0D2K2 578 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 SOWAHAQ2M3V2 549 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 ZNF394Q53GI3 561 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 SLC47A2Q86VL8 602 aa16.79■□□□□ 0.28
PHF1-211ENST00000495509 TMTC1Q8IUR5 882 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms