RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 MTMR12Q9C0I1 747 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 INTS13Q9NVM9 706 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 MAN1B1Q9UKM7 699 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 USP15Q9Y4E8 981 aaPredicted RBP18.51■□□□□ 0.55
SNX17-209ENST00000494893 TIMM13Q9Y5L4 95 aaPredicted RBP18.51■□□□□ 0.55
SNX17-209ENST00000494893 BACE2Q9Y5Z0 518 aa18.51■□□□□ 0.55
SNX17-209ENST00000494893 EXOC3O60645 756 aa18.5■□□□□ 0.55
SNX17-209ENST00000494893 SMC2O95347 1197 aa18.5■□□□□ 0.55
SNX17-209ENST00000494893 GLUD1P00367 558 aa18.5■□□□□ 0.55
SNX17-209ENST00000494893 HOXB8P17481 243 aaPredicted RBP18.5■□□□□ 0.55
SNX17-209ENST00000494893 POLR2BP30876 1174 aaKnown RBP18.5■□□□□ 0.55
SNX17-209ENST00000494893 SMAD2Q15796 467 aaKnown RBP18.5■□□□□ 0.55
SNX17-209ENST00000494893 COBLL1Q53SF7 1204 aa18.5■□□□□ 0.55
SNX17-209ENST00000494893 ZNF658Q5TYW1 1059 aaPredicted RBP18.5■□□□□ 0.55
SNX17-209ENST00000494893 RBM43Q6ZSC3 357 aaKnown RBP18.5■□□□□ 0.55
SNX17-209ENST00000494893 ADAMTS19Q8TE59 1207 aa18.5■□□□□ 0.55
SNX17-209ENST00000494893 ZNF516Q92618 1163 aa18.5■□□□□ 0.55
SNX17-209ENST00000494893 MAN1C1Q9NR34 630 aa18.5■□□□□ 0.55
SNX17-209ENST00000494893 DZANK1Q9NVP4 752 aa18.5■□□□□ 0.55
SNX17-209ENST00000494893 RMND1Q9NWS8 449 aa18.5■□□□□ 0.55
SNX17-209ENST00000494893 C5orf42Q9H799 3197 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 TULP1O00294 542 aaPredicted RBP18.49■□□□□ 0.55
SNX17-209ENST00000494893 ITGB3P05106 788 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 CD44P16070 742 aaKnown RBP18.49■□□□□ 0.55
SNX17-209ENST00000494893 OR1D2P34982 312 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 CREMQ03060 361 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 RAB33AQ14088 237 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 NFIL3Q16649 462 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 PUS10Q3MIT2 529 aaKnown RBP18.49■□□□□ 0.55
SNX17-209ENST00000494893 RARS2Q5T160 578 aaKnown RBP18.49■□□□□ 0.55
SNX17-209ENST00000494893 ISM2Q6H9L7 571 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 PDXDC1Q6P996 788 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 ANKS3Q6ZW76 656 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 SENP8Q96LD8 212 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 CGRRF1Q99675 332 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 HOOK1Q9UJC3 728 aaKnown RBP18.49■□□□□ 0.55
SNX17-209ENST00000494893 FBXL5Q9UKA1 691 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 AGAP1Q9UPQ3 857 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 CDY1Q9Y6F8 540 aa18.49■□□□□ 0.55
SNX17-209ENST00000494893 KIF20AO95235 890 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 C1RP00736 705 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 WEE2P0C1S8 567 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 SRGAP2BP0DMP2 458 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 DLATP10515 647 aaKnown RBP18.48■□□□□ 0.55
SNX17-209ENST00000494893 TAF6P49848 677 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 PMS1P54277 932 aaKnown RBP18.48■□□□□ 0.55
SNX17-209ENST00000494893 MYBPC2Q14324 1141 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 SURF1Q15526 300 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 C1orf220Q5T0J3 134 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 SLC8B1Q6J4K2 584 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 DSTYKQ6XUX3 929 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 WDR49Q8IV35 697 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 ADSSL1Q8N142 457 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 PARD3BQ8TEW8 1205 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 CACTINQ8WUQ7 758 aaKnown RBP18.48■□□□□ 0.55
SNX17-209ENST00000494893 CCDC127Q96BQ5 260 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 CD320Q9NPF0 282 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 FBXW11Q9UKB1 542 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 ITGA11Q9UKX5 1188 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 SCN1AP35498 2009 aa18.48■□□□□ 0.55
SNX17-209ENST00000494893 TCF20Q9UGU0 1960 aaKnown RBP18.48■□□□□ 0.55
SNX17-209ENST00000494893 TSC2P49815 1807 aa18.47■□□□□ 0.55
SNX17-209ENST00000494893 LRRIQ3A6PVS8 624 aaPredicted RBP18.47■□□□□ 0.55
SNX17-209ENST00000494893 CALUO43852 315 aaPredicted RBP18.47■□□□□ 0.55
SNX17-209ENST00000494893 RFPL2O75678 378 aa18.47■□□□□ 0.55
SNX17-209ENST00000494893 OAZ2O95190 189 aa18.47■□□□□ 0.55
SNX17-209ENST00000494893 PAPLNO95428 1278 aa18.47■□□□□ 0.55
SNX17-209ENST00000494893 TMEM191BP0C7N4 346 aa18.47■□□□□ 0.55
SNX17-209ENST00000494893 DLG4P78352 724 aa18.47■□□□□ 0.55
SNX17-209ENST00000494893 ROR1Q01973 937 aa18.47■□□□□ 0.55
SNX17-209ENST00000494893 MORC3Q14149 939 aa18.47■□□□□ 0.55
SNX17-209ENST00000494893 CENPPQ6IPU0 288 aa18.47■□□□□ 0.55
SNX17-209ENST00000494893 CSGALNACT2Q8N6G5 542 aa18.47■□□□□ 0.55
SNX17-209ENST00000494893 KREMEN2Q8NCW0 462 aa18.47■□□□□ 0.55
SNX17-209ENST00000494893 APPL2Q8NEU8 664 aa18.47■□□□□ 0.55
SNX17-209ENST00000494893 ZNF707Q96C28 371 aaPredicted RBP18.47■□□□□ 0.55
SNX17-209ENST00000494893 ADAM7Q9H2U9 754 aa18.47■□□□□ 0.55
SNX17-209ENST00000494893 TTC28Q96AY4 2481 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 SYCE3A1L190 88 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 WDR27A2RRH5 827 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 BIN1O00499 593 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 AKAP3O75969 853 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 CYP11A1P05108 521 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 TYMPP19971 482 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 PAX3P23760 479 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 NR2F2P24468 414 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 ZNF445P59923 1031 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 CLDN10P78369 228 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 DUOXA2Q1HG44 320 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 CTXN3Q4LDR2 81 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 TMC5Q6UXY8 1006 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 TRAPPC11Q7Z392 1133 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 LRRC52Q8N7C0 313 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 HDAC7Q8WUI4 952 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 ANKRD36BP1Q96IX9 119 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 UHRF1Q96T88 793 aaPredicted RBP18.46■□□□□ 0.55
SNX17-209ENST00000494893 RTP3Q9BQQ7 232 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 SFXN1Q9H9B4 322 aa18.46■□□□□ 0.55
SNX17-209ENST00000494893 KPNA7A9QM74 516 aa18.45■□□□□ 0.54
SNX17-209ENST00000494893 PPP1R3GB7ZBB8 358 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms