RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 HEBP1Q9NRV9 189 aa25.28■■□□□ 1.64
COL27A1-208ENST00000494780 LACTBL1A8MY62 500 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 HNRNPDLO14979 420 aaKnown RBP25.27■■□□□ 1.64
COL27A1-208ENST00000494780 OGTO15294 1046 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 FAM13AO94988 1023 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 CD2BP2O95400 341 aaKnown RBP25.27■■□□□ 1.64
COL27A1-208ENST00000494780 BMP15O95972 392 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 ADRB2P07550 413 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 TARSP26639 723 aaKnown RBP25.27■■□□□ 1.64
COL27A1-208ENST00000494780 RPS9P46781 194 aaKnown RBP25.27■■□□□ 1.64
COL27A1-208ENST00000494780 ZNF131P52739 623 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 USP37Q86T82 979 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 HS6ST3Q8IZP7 471 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 MYCT1Q8N699 235 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 SMARCD2Q92925 531 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 TRMT61BQ9BVS5 477 aaKnown RBP25.27■■□□□ 1.64
COL27A1-208ENST00000494780 BRD9Q9H8M2 597 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 RPF1Q9H9Y2 349 aaKnown RBP25.27■■□□□ 1.64
COL27A1-208ENST00000494780 PARVGQ9HBI0 331 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 ASAH2Q9NR71 780 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 SMC3Q9UQE7 1217 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 ZNF292O60281 2723 aa25.27■■□□□ 1.64
COL27A1-208ENST00000494780 PATJQ8NI35 1801 aa25.26■■□□□ 1.63
COL27A1-208ENST00000494780 K7ENM7 598 aa25.26■■□□□ 1.63
COL27A1-208ENST00000494780 FAM189A1O60320 539 aa25.26■■□□□ 1.63
COL27A1-208ENST00000494780 KINO60870 393 aaKnown RBP25.26■■□□□ 1.63
COL27A1-208ENST00000494780 MOSPD3O75425 235 aa25.26■■□□□ 1.63
COL27A1-208ENST00000494780 GRM2Q14416 872 aa25.26■■□□□ 1.63
COL27A1-208ENST00000494780 ENOX2Q16206 610 aaKnown RBP25.26■■□□□ 1.63
COL27A1-208ENST00000494780 ERMP1Q7Z2K6 904 aa25.26■■□□□ 1.63
COL27A1-208ENST00000494780 CD302Q8IX05 232 aa25.26■■□□□ 1.63
COL27A1-208ENST00000494780 TMEM130Q8N3G9 435 aa25.26■■□□□ 1.63
COL27A1-208ENST00000494780 BLOC1S4Q9NUP1 217 aa25.26■■□□□ 1.63
COL27A1-208ENST00000494780 YIPF1Q9Y548 306 aa25.26■■□□□ 1.63
COL27A1-208ENST00000494780 TIMM13Q9Y5L4 95 aaPredicted RBP25.26■■□□□ 1.63
COL27A1-208ENST00000494780 OR6C75A6NL08 312 aa25.25■■□□□ 1.63
COL27A1-208ENST00000494780 MAN2B1O00754 1011 aa25.25■■□□□ 1.63
COL27A1-208ENST00000494780 NRG2O14511 850 aaPredicted RBP25.25■■□□□ 1.63
COL27A1-208ENST00000494780 TRAK2O60296 914 aa25.25■■□□□ 1.63
COL27A1-208ENST00000494780 MYL4P12829 197 aa25.25■■□□□ 1.63
COL27A1-208ENST00000494780 TYMPP19971 482 aa25.25■■□□□ 1.63
COL27A1-208ENST00000494780 ABCD1P33897 745 aa25.25■■□□□ 1.63
COL27A1-208ENST00000494780 LONP1P36776 959 aaKnown RBP25.25■■□□□ 1.63
COL27A1-208ENST00000494780 PLD1Q13393 1074 aa25.25■■□□□ 1.63
COL27A1-208ENST00000494780 DHX8Q14562 1220 aaKnown RBP25.25■■□□□ 1.63
COL27A1-208ENST00000494780 LARP1BQ659C4 914 aaKnown RBP25.25■■□□□ 1.63
COL27A1-208ENST00000494780 DSTYKQ6XUX3 929 aa25.25■■□□□ 1.63
COL27A1-208ENST00000494780 IRF7Q92985 503 aa25.25■■□□□ 1.63
COL27A1-208ENST00000494780 ZSWIM3Q96MP5 696 aa25.25■■□□□ 1.63
COL27A1-208ENST00000494780 TRPV4Q9HBA0 871 aa25.25■■□□□ 1.63
COL27A1-208ENST00000494780 TRPV5Q9NQA5 729 aa25.25■■□□□ 1.63
COL27A1-208ENST00000494780 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.25■■□□□ 1.63
COL27A1-208ENST00000494780 A0A0B4J269 797 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 SHISA7A6NL88 538 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 VNN2O95498 520 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 PSMC3P17980 439 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 PAX3P23760 479 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 GUCY2FP51841 1108 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 CSTF1Q05048 431 aaKnown RBP25.24■■□□□ 1.63
COL27A1-208ENST00000494780 GPR17Q13304 367 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 SPATA1Q5VX52 437 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 LRRC15Q8TF66 581 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 DEPDC1BQ8WUY9 529 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 RUBCNQ92622 972 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 RAD54LQ92698 747 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 GPR88Q9GZN0 384 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 UPF2Q9HAU5 1272 aaKnown RBP25.24■■□□□ 1.63
COL27A1-208ENST00000494780 PCDHGA2Q9Y5H1 932 aa25.24■■□□□ 1.63
COL27A1-208ENST00000494780 SPTLC1O15269 473 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 KRT18P05783 430 aaKnown RBP25.23■■□□□ 1.63
COL27A1-208ENST00000494780 OR4Q2P0C623 313 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 PLCG1P19174 1290 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 FZD5Q13467 585 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 MYBPC2Q14324 1141 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 MCM6Q14566 821 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 OVOS1Q6IE37 1185 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 VITQ6UXI7 678 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 BRAPQ7Z569 592 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 MAP4K3Q8IVH8 894 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 SUMF1Q8NBK3 374 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 ZSCAN18Q8TBC5 510 aaPredicted RBP25.23■■□□□ 1.63
COL27A1-208ENST00000494780 PGLYRP2Q96PD5 576 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 HINFPQ9BQA5 517 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 MSTO1Q9BUK6 570 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 CPSF3Q9UKF6 684 aaKnown RBP25.23■■□□□ 1.63
COL27A1-208ENST00000494780 OTOGLQ3ZCN5 2332 aa25.23■■□□□ 1.63
COL27A1-208ENST00000494780 TBCAO75347 108 aaKnown RBP25.22■■□□□ 1.63
COL27A1-208ENST00000494780 GJA1P17302 382 aa25.22■■□□□ 1.63
COL27A1-208ENST00000494780 GTF2BQ00403 316 aa25.22■■□□□ 1.63
COL27A1-208ENST00000494780 DUSP4Q13115 394 aa25.22■■□□□ 1.63
COL27A1-208ENST00000494780 KARSQ15046 597 aaKnown RBP25.22■■□□□ 1.63
COL27A1-208ENST00000494780 RASSF8Q8NHQ8 419 aa25.22■■□□□ 1.63
COL27A1-208ENST00000494780 SHKBP1Q8TBC3 707 aa25.22■■□□□ 1.63
COL27A1-208ENST00000494780 E2F7Q96AV8 911 aa25.22■■□□□ 1.63
COL27A1-208ENST00000494780 ZNF334Q9HCZ1 680 aaPredicted RBP25.22■■□□□ 1.63
COL27A1-208ENST00000494780 PPEF2O14830 753 aa25.21■■□□□ 1.63
COL27A1-208ENST00000494780 GDI1P31150 447 aa25.21■■□□□ 1.63
COL27A1-208ENST00000494780 VIPR2P41587 438 aa25.21■■□□□ 1.63
COL27A1-208ENST00000494780 ALDH1A3P47895 512 aa25.21■■□□□ 1.63
COL27A1-208ENST00000494780 EPHB3P54753 998 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms