RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 CCNE1P24864 410 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 RPS9P46781 194 aaKnown RBP10.49□□□□□ -0.73
UBR4-216ENST00000494503 ALDH1A3P47895 512 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 LIG4P49917 911 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 EPHB3P54753 998 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 NRLP54845 237 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 LMNB2Q03252 620 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 PLD1Q13393 1074 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 TAF12Q16514 161 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 HEATR6Q6AI08 1181 aaKnown RBP10.49□□□□□ -0.73
UBR4-216ENST00000494503 VITQ6UXI7 678 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 ALKAL1Q6UXT8 129 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 KCNK18Q7Z418 384 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 GPR161Q8N6U8 529 aaKnown RBP10.49□□□□□ -0.73
UBR4-216ENST00000494503 C4orf32Q8N8J7 132 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 IGSF22Q8N9C0 903 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 LEMD2Q8NC56 503 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 DEPDC1BQ8WUY9 529 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 CLDN23Q96B33 292 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 ZSCAN31Q96LW9 406 aaPredicted RBP10.49□□□□□ -0.73
UBR4-216ENST00000494503 ZNF334Q9HCZ1 680 aaPredicted RBP10.49□□□□□ -0.73
UBR4-216ENST00000494503 PTPRHQ9HD43 1115 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 AVENQ9NQS1 362 aaPredicted RBP10.49□□□□□ -0.73
UBR4-216ENST00000494503 SH2B1Q9NRF2 756 aaPredicted RBP10.49□□□□□ -0.73
UBR4-216ENST00000494503 CEP72Q9P209 647 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
UBR4-216ENST00000494503 KIF3AQ9Y496 699 aa10.49□□□□□ -0.73
UBR4-216ENST00000494503 KIF26AQ9ULI4 1882 aaPredicted RBP10.49□□□□□ -0.73
UBR4-216ENST00000494503 ATG2BQ96BY7 2078 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 NPHP3-ACAD11A0A0J9YXS1 232 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 HEPACAM2A8MVW5 462 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 H3BQV1 296 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 K7ENM7 598 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 LAD1O00515 517 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 NRG2O14511 850 aaPredicted RBP10.48□□□□□ -0.73
UBR4-216ENST00000494503 HNRNPDLO14979 420 aaKnown RBP10.48□□□□□ -0.73
UBR4-216ENST00000494503 XPOTO43592 962 aaKnown RBP10.48□□□□□ -0.73
UBR4-216ENST00000494503 SDHBP21912 280 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 PROZP22891 400 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 SOX9P48436 509 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 TOB1P50616 345 aaPredicted RBP10.48□□□□□ -0.73
UBR4-216ENST00000494503 CCR3P51677 355 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 GUCY2FP51841 1108 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 SPEM2Q0P670 501 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 DUSP4Q13115 394 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 MAPK7Q13164 816 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 SLC10A6Q3KNW5 377 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 XKR4Q5GH76 650 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 ARMCX5Q6P1M9 558 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 POTEHQ6S545 545 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 C1orf186Q6ZWK4 172 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.48□□□□□ -0.73
UBR4-216ENST00000494503 ZBTB44Q8NCP5 570 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 TTC16Q8NEE8 873 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 GCNAQ96QF7 691 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 SEPT5Q99719 369 aaPredicted RBP10.48□□□□□ -0.73
UBR4-216ENST00000494503 TIPINQ9BVW5 301 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 EPC1Q9H2F5 836 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 ATXN3LQ9H3M9 355 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 C17orf75Q9HAS0 396 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 PRMT8Q9NR22 394 aaPredicted RBP10.48□□□□□ -0.73
UBR4-216ENST00000494503 KCNG1Q9UIX4 513 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 SLC27A5Q9Y2P5 690 aa10.48□□□□□ -0.73
UBR4-216ENST00000494503 DCDC2BA2VCK2 349 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 H0YCG3 227 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 TBC1D4O60343 1298 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 SOAT2O75908 522 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 FAM13AO94988 1023 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 CLTAP09496 248 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 PLA2G4BP0C869 781 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 MAPTP10636 758 aaKnown RBP10.47□□□□□ -0.73
UBR4-216ENST00000494503 GUCY2CP25092 1073 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 TNFSF9P41273 254 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 CXCL12P48061 93 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 SATB1Q01826 763 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 SIM2Q14190 667 aaPredicted RBP10.47□□□□□ -0.73
UBR4-216ENST00000494503 MRPL58Q14197 206 aaKnown RBP10.47□□□□□ -0.73
UBR4-216ENST00000494503 LRRC32Q14392 662 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 IL17AQ16552 155 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 ARHGAP15Q53QZ3 475 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 STXBP5Q5T5C0 1151 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 OVOS1Q6IE37 1185 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 ZPBP2Q6X784 338 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 CEP68Q76N32 757 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 HAUS6Q7Z4H7 955 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 MYCT1Q8N699 235 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 TMEM161BQ8NDZ6 487 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 SHKBP1Q8TBC3 707 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 BORCS6Q96GS4 357 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 ZFYVE19Q96K21 471 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 FAM126AQ9BYI3 521 aaPredicted RBP10.47□□□□□ -0.73
UBR4-216ENST00000494503 CHRDQ9H2X0 955 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 RPF1Q9H9Y2 349 aaKnown RBP10.47□□□□□ -0.73
UBR4-216ENST00000494503 RBM12Q9NTZ6 932 aaKnown RBP10.47□□□□□ -0.73
UBR4-216ENST00000494503 DLL3Q9NYJ7 618 aa10.47□□□□□ -0.73
UBR4-216ENST00000494503 LARSQ9P2J5 1176 aaKnown RBP10.47□□□□□ -0.73
UBR4-216ENST00000494503 UBQLN1Q9UMX0 589 aaKnown RBP10.47□□□□□ -0.73
UBR4-216ENST00000494503 LACTBL1A8MY62 500 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 PRR5-ARHGAP8B1AHC4 643 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 CHURC1-FNTBB4DL54 471 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms