RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 NOC2LQ9Y3T9 749 aaKnown RBP7.28□□□□□ -1.24
MSH5-217ENST00000494458 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.28□□□□□ -1.24
MSH5-217ENST00000494458 TRPV2Q9Y5S1 764 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 TRIP12Q14669 1992 aaPredicted RBP7.28□□□□□ -1.24
MSH5-217ENST00000494458 HTTP42858 3142 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 TCRBV5S1A1TA0A578 114 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 EFCAB8A8MWE9 144 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 TADA3O75528 432 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 ECM2O94769 699 aaPredicted RBP7.27□□□□□ -1.25
MSH5-217ENST00000494458 MOCS3O95396 460 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 NPTXRO95502 500 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 TNNC2P02585 160 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 FTLP02792 175 aaPredicted RBP7.27□□□□□ -1.25
MSH5-217ENST00000494458 ATP1A1P05023 1023 aaKnown RBP7.27□□□□□ -1.25
MSH5-217ENST00000494458 INHAP05111 366 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 MMEP08473 750 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 PAEPP09466 180 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 FGFR4P22455 802 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 LRPAP1P30533 357 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 GRK4P32298 578 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 GPC5P78333 572 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 RBP5P82980 135 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 TFAMQ00059 246 aaKnown RBP7.27□□□□□ -1.25
MSH5-217ENST00000494458 TMEM62Q0P6H9 643 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 PTP4A2Q12974 167 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 PDAP1Q13442 181 aaKnown RBP7.27□□□□□ -1.25
MSH5-217ENST00000494458 BIRC3Q13489 604 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 ITGA7Q13683 1181 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 TMEM132DQ14C87 1099 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 IFI16Q16666 785 aaKnown RBP7.27□□□□□ -1.25
MSH5-217ENST00000494458 FBXO47Q5MNV8 452 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 RSPH3Q86UC2 560 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 PHF13Q86YI8 300 aaPredicted RBP7.27□□□□□ -1.25
MSH5-217ENST00000494458 CREG2Q8IUH2 290 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 RHOT2Q8IXI1 618 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 TTC39CQ8N584 583 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 USP38Q8NB14 1042 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 GSTCDQ8NEC7 633 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 SLC35G2Q8TBE7 412 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 RAET1EQ8TD07 263 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 U2AF1L4Q8WU68 220 aaKnown RBP7.27□□□□□ -1.25
MSH5-217ENST00000494458 ZNF606Q8WXB4 792 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 ZNF592Q92610 1267 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 ZSWIM1Q9BR11 485 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.27□□□□□ -1.25
MSH5-217ENST00000494458 CCDC94Q9BW85 323 aaPredicted RBP7.27□□□□□ -1.25
MSH5-217ENST00000494458 ZNF518BQ9C0D4 1074 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 CXCL16Q9H2A7 254 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 LHX5Q9H2C1 402 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 HMX1Q9NP08 348 aaPredicted RBP7.27□□□□□ -1.25
MSH5-217ENST00000494458 ACP6Q9NPH0 428 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 CISHQ9NSE2 258 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 GDAP2Q9NXN4 497 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 SNTG2Q9NY99 539 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 RNF14Q9UBS8 474 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 TSKSQ9UJT2 592 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 GTF3C4Q9UKN8 822 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 SNX12Q9UMY4 172 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 SAR1BQ9Y6B6 198 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 CDY2AQ9Y6F7 541 aa7.27□□□□□ -1.25
MSH5-217ENST00000494458 SMIM28A0A1B0GU29 152 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 MACROD2A1Z1Q3 448 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 GPR182O15218 404 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 PHACTR2O75167 634 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 CILPO75339 1184 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 PALMO75781 387 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 URI1O94763 535 aaPredicted RBP7.26□□□□□ -1.25
MSH5-217ENST00000494458 LSM8O95777 96 aaKnown RBP7.26□□□□□ -1.25
MSH5-217ENST00000494458 TMEM191BP0C7N4 346 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 MYBL1P10243 752 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 HARSP12081 509 aaKnown RBP7.26□□□□□ -1.25
MSH5-217ENST00000494458 TCP1P17987 556 aaKnown RBP7.26□□□□□ -1.25
MSH5-217ENST00000494458 PDE6CP51160 858 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 GSCP56915 257 aaPredicted RBP7.26□□□□□ -1.25
MSH5-217ENST00000494458 OSTNP61366 133 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 YWHAEP62258 255 aaKnown RBP7.26□□□□□ -1.25
MSH5-217ENST00000494458 FAM189BP81408 668 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 TRPC3Q13507 836 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 ZNF699Q32M78 642 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 MON1BQ7L1V2 547 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 ZNF598Q86UK7 904 aaKnown RBP7.26□□□□□ -1.25
MSH5-217ENST00000494458 NT5DC3Q86UY8 548 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 MCOLN2Q8IZK6 566 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 WDTC1Q8N5D0 677 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 RBBP8NLQ8NC74 664 aaPredicted RBP7.26□□□□□ -1.25
MSH5-217ENST00000494458 ARRDC4Q8NCT1 418 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 PPP1R13LQ8WUF5 828 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 ANKRD7Q92527 254 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 ELMO3Q96BJ8 720 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 ARHGEF26Q96DR7 871 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 HES6Q96HZ4 224 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 RPGRIP1Q96KN7 1286 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 ALS2CR12Q96Q35 445 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 PPP1R10Q96QC0 940 aaKnown RBP7.26□□□□□ -1.25
MSH5-217ENST00000494458 RPS6KC1Q96S38 1066 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 PPP1R16BQ96T49 567 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 OSBPL7Q9BZF2 842 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 IMPG2Q9BZV3 1241 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 THAP2Q9H0W7 228 aa7.26□□□□□ -1.25
MSH5-217ENST00000494458 SDCBP2Q9H190 292 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms