RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 FAM171A2A8MVW0 826 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 C11orf95C9JLR9 678 aaPredicted RBP7.44□□□□□ -1.22
SNX13-210ENST00000494402 H3BNC9 293 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 NKRFO15226 690 aaKnown RBP eCLIP7.44□□□□□ -1.22
SNX13-210ENST00000494402 GJB3O75712 270 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 SLC22A3O75751 556 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 PRPF6O94906 941 aaKnown RBP7.44□□□□□ -1.22
SNX13-210ENST00000494402 AFPP02771 609 aaKnown RBP7.44□□□□□ -1.22
SNX13-210ENST00000494402 PRKCBP05771 671 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 BCRP11274 1271 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 BMP8BP34820 402 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 DPP6P42658 865 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 BAG6P46379 1132 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 PNLIPRP1P54315 467 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 GALNT2Q10471 571 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 SEMA3AQ14563 771 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 PUM1Q14671 1186 aaKnown RBP eCLIP7.44□□□□□ -1.22
SNX13-210ENST00000494402 PPA1Q15181 289 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 ANKRD1Q15327 319 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 GPR68Q15743 365 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 ZNF827Q17R98 1081 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 RAB12Q6IQ22 244 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 BTNL9Q6UXG8 535 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 THAP5Q7Z6K1 395 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 PXKQ7Z7A4 578 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 LYSMD2Q8IV50 215 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 TTC39CQ8N584 583 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 LZTR1Q8N653 840 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 DTWD2Q8NBA8 298 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 OR6B3Q8NGW1 331 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 BRIX1Q8TDN6 353 aaKnown RBP7.44□□□□□ -1.22
SNX13-210ENST00000494402 SH3RF2Q8TEC5 729 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 USP6NLQ92738 828 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 TRIM43Q96BQ3 446 aaPredicted RBP7.44□□□□□ -1.22
SNX13-210ENST00000494402 TRIM44Q96DX7 344 aaPredicted RBP7.44□□□□□ -1.22
SNX13-210ENST00000494402 CLPTM1LQ96KA5 538 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 SNX27Q96L92 541 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 P2RX7Q99572 595 aaKnown RBP7.44□□□□□ -1.22
SNX13-210ENST00000494402 MYL10Q9BUA6 226 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 DNAI2Q9GZS0 605 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 ABHD16BQ9H3Z7 469 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 PRDM8Q9NQV8 689 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 TBC1D14Q9P2M4 693 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 PRSS50Q9UI38 385 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 DSEQ9UL01 958 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 KCNH3Q9ULD8 1083 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 COG5Q9UP83 839 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 DTNAQ9Y4J8 743 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 HS3ST4Q9Y661 456 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 PTGES3LE9PB15 166 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 DDX39AO00148 427 aaKnown RBP7.43□□□□□ -1.22
SNX13-210ENST00000494402 VILLO15195 856 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 IPO8O15397 1037 aaKnown RBP7.43□□□□□ -1.22
SNX13-210ENST00000494402 FOXP2O15409 715 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 WIPF1O43516 503 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 WFS1O76024 890 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 CLEC3BP05452 202 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 PFKMP08237 780 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 ALAS1P13196 640 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 HLA-DPA1P20036 260 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 CYP7A1P22680 504 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 GABRB3P28472 473 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 EEF1DP29692 281 aaKnown RBP7.43□□□□□ -1.22
SNX13-210ENST00000494402 GJA4P35212 333 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 MCM2P49736 904 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 RAD23AP54725 363 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 IL1RL1Q01638 556 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 MGAT2Q10469 447 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 MPP3Q13368 585 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 TBCEQ15813 527 aaPredicted RBP7.43□□□□□ -1.22
SNX13-210ENST00000494402 DBN1Q16643 649 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 KYNUQ16719 465 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 TTC38Q5R3I4 469 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 CCDC155Q8N6L0 562 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 PIGOQ8TEQ8 1089 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 ZNF384Q8TF68 577 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 TUBGCP5Q96RT8 1024 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 REEP2Q9BRK0 252 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 RTKNQ9BST9 563 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 TRIM54Q9BYV2 358 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 TRIM6Q9C030 488 aaPredicted RBP7.43□□□□□ -1.22
SNX13-210ENST00000494402 ADAM7Q9H2U9 754 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 EPB41L1Q9H4G0 881 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 ADPRHL2Q9NX46 363 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 SH3BGRL2Q9UJC5 107 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 PCDHA6Q9UN73 950 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 SMG5Q9UPR3 1016 aaKnown RBP7.43□□□□□ -1.22
SNX13-210ENST00000494402 MTO1Q9Y2Z2 717 aaKnown RBP7.43□□□□□ -1.22
SNX13-210ENST00000494402 PAXBP1Q9Y5B6 917 aa7.43□□□□□ -1.22
SNX13-210ENST00000494402 WTIPA6NIX2 430 aaPredicted RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 ADARB2-AS1A8MUL3 147 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 SH2B2O14492 632 aaPredicted RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 DGKIO75912 1065 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 ENDOD1O94919 500 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 ANXA1P04083 346 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 CNPP09543 421 aaKnown RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 SNRPBP14678 240 aaKnown RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 VAV1P15498 845 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 RPS2P15880 293 aaKnown RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 NPPBP16860 134 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms