RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 SPATA18Q8TC71 538 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 OLA1Q9NTK5 396 aaKnown RBP12.29□□□□□ -0.44
COL25A1-204ENST00000494183 GTSE1Q9NYZ3 720 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 TSR3Q9UJK0 312 aaKnown RBP12.29□□□□□ -0.44
COL25A1-204ENST00000494183 A0A087WZ62 844 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 C3orf70A6NLC5 250 aaPredicted RBP12.29□□□□□ -0.44
COL25A1-204ENST00000494183 KPNA7A9QM74 516 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 PDHXO00330 501 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 GNGT2O14610 69 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 ACO1P21399 889 aaKnown RBP12.29□□□□□ -0.44
COL25A1-204ENST00000494183 CNTN2Q02246 1040 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 LY6KQ17RY6 165 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 PAN2Q504Q3 1202 aaKnown RBP12.29□□□□□ -0.44
COL25A1-204ENST00000494183 TAS2R42Q7RTR8 314 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 DCP1BQ8IZD4 617 aaKnown RBP12.29□□□□□ -0.44
COL25A1-204ENST00000494183 FBXL16Q8N461 479 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 PDZD8Q8NEN9 1154 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 ULK4Q96C45 1275 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 SPDL1Q96EA4 605 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 RBM15Q96T37 977 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL25A1-204ENST00000494183 FDXACB1Q9BRP7 624 aaPredicted RBP12.29□□□□□ -0.44
COL25A1-204ENST00000494183 AGO4Q9HCK5 861 aaKnown RBP12.29□□□□□ -0.44
COL25A1-204ENST00000494183 TXLNGQ9NUQ3 528 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 DPP3Q9NY33 737 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 C2CD2LO14523 706 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 SLURP2P0DP57 97 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 NCAM1P13591 858 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 RHBDL3P58872 404 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 PGM5Q15124 567 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 P3H1Q32P28 736 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 LBHD1Q9BQE6 289 aaPredicted RBP12.29□□□□□ -0.44
COL25A1-204ENST00000494183 RBM12Q9NTZ6 932 aaKnown RBP12.29□□□□□ -0.44
COL25A1-204ENST00000494183 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.29□□□□□ -0.44
COL25A1-204ENST00000494183 HACD3Q9P035 362 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 SUN2Q9UH99 717 aa12.29□□□□□ -0.44
COL25A1-204ENST00000494183 MROH2AA6NES4 1674 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 FAM200BP0CF97 657 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 TGFB3P10600 412 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 SLC8A1P32418 973 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 RARRES1P49788 294 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 PPP2R2AP63151 447 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 BYSLQ13895 437 aaKnown RBP12.28□□□□□ -0.44
COL25A1-204ENST00000494183 E2F5Q15329 346 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 HIPK4Q8NE63 616 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 FEZF2Q8TBJ5 459 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 RMDN2Q96LZ7 410 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 ABI2Q9NYB9 513 aaPredicted RBP12.28□□□□□ -0.44
COL25A1-204ENST00000494183 APOBEC2Q9Y235 224 aaKnown RBP12.28□□□□□ -0.44
COL25A1-204ENST00000494183 PPME1Q9Y570 386 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 INSRRP14616 1297 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 ACADSBP45954 432 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 KIF19Q2TAC6 998 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 TAS1R2Q8TE23 839 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 THAP2Q9H0W7 228 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 PPLO60437 1756 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 CYBBP04839 570 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 CYP2C8P10632 490 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 SLC26A2P50443 739 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 ST3GAL1Q11201 340 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 GOLGA7BQ2TAP0 167 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 TBC1D1Q86TI0 1168 aaPredicted RBP12.28□□□□□ -0.44
COL25A1-204ENST00000494183 ZNF677Q86XU0 584 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 NUDCD3Q8IVD9 361 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 CERS5Q8N5B7 392 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 DNERQ8NFT8 737 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 OSMRQ99650 979 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 MMTAG2Q9BU76 263 aaKnown RBP12.28□□□□□ -0.44
COL25A1-204ENST00000494183 TRAIPQ9BWF2 469 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 FAM198AQ9UFP1 575 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 GTF3C4Q9UKN8 822 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 GOLGA8RI6L899 631 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 SPAG7O75391 227 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 GARTP22102 1010 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 PNPLA4P41247 253 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 SNCBQ16143 134 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 FASTKD1Q53R41 847 aaKnown RBP12.28□□□□□ -0.44
COL25A1-204ENST00000494183 BEND6Q5SZJ8 279 aaPredicted RBP12.28□□□□□ -0.44
COL25A1-204ENST00000494183 MPZL3Q6UWV2 235 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 TADA2BQ86TJ2 420 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 ACOT1Q86TX2 421 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 SLITRK1Q96PX8 696 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 TUBB6Q9BUF5 446 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 Q9H521 79 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 RRAGCQ9HB90 399 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 SETD4Q9NVD3 440 aa12.28□□□□□ -0.44
COL25A1-204ENST00000494183 LSM7Q9UK45 103 aaKnown RBP12.28□□□□□ -0.44
COL25A1-204ENST00000494183 CCDC195A0A1B0GUA6 201 aa12.27□□□□□ -0.44
COL25A1-204ENST00000494183 TFRCP02786 760 aaKnown RBP12.27□□□□□ -0.44
COL25A1-204ENST00000494183 ALDH7A1P49419 539 aaKnown RBP12.27□□□□□ -0.44
COL25A1-204ENST00000494183 EFHC1Q5JVL4 640 aa12.27□□□□□ -0.44
COL25A1-204ENST00000494183 FKBP1CQ5VVH2 108 aa12.27□□□□□ -0.44
COL25A1-204ENST00000494183 MIPOL1Q8TD10 442 aa12.27□□□□□ -0.44
COL25A1-204ENST00000494183 SYN2Q92777 582 aaPredicted RBP12.27□□□□□ -0.44
COL25A1-204ENST00000494183 TMEM169Q96HH4 297 aa12.27□□□□□ -0.44
COL25A1-204ENST00000494183 CYTH2Q99418 400 aa12.27□□□□□ -0.44
COL25A1-204ENST00000494183 EGFL8Q99944 293 aa12.27□□□□□ -0.44
COL25A1-204ENST00000494183 EFHD1Q9BUP0 239 aa12.27□□□□□ -0.44
COL25A1-204ENST00000494183 ASCC2Q9H1I8 757 aaPredicted RBP12.27□□□□□ -0.44
COL25A1-204ENST00000494183 NDFIP2Q9NV92 336 aa12.27□□□□□ -0.44
COL25A1-204ENST00000494183 INTUQ9ULD6 942 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms