RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PEX3P56589 373 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 OSTNP61366 133 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 SARNPP82979 210 aaKnown RBP8.87□□□□□ -0.99
HDAC6-234ENST00000493923 LRMPQ12912 555 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 GNL2Q13823 731 aaKnown RBP8.87□□□□□ -0.99
HDAC6-234ENST00000493923 PDIA5Q14554 519 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 MAPK6Q16659 721 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 USP41Q3LFD5 358 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 SEZ6Q53EL9 994 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 ATF7IP2Q5U623 682 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 FAM171A1Q5VUB5 890 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 FOXD4L5Q5VV16 416 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-234ENST00000493923 CWF19L1Q69YN2 538 aaKnown RBP8.87□□□□□ -0.99
HDAC6-234ENST00000493923 CC2D1AQ6P1N0 951 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-234ENST00000493923 CCDC149Q6ZUS6 474 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 PPFIBP1Q86W92 1011 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 SPATS2Q86XZ4 545 aaKnown RBP8.87□□□□□ -0.99
HDAC6-234ENST00000493923 CMASQ8NFW8 434 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-234ENST00000493923 LNX1Q8TBB1 728 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-234ENST00000493923 HNRNPLLQ8WVV9 542 aaKnown RBP8.87□□□□□ -0.99
HDAC6-234ENST00000493923 FOXD4L4Q8WXT5 416 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-234ENST00000493923 ACO2Q99798 780 aaKnown RBP8.87□□□□□ -0.99
HDAC6-234ENST00000493923 SCAND2PQ9GZW5 306 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-234ENST00000493923 NT5C3AQ9H0P0 336 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 C2orf40Q9H1Z8 148 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 PTPRHQ9HD43 1115 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 ARHGAP28Q9P2N2 729 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 LCMT1Q9UIC8 334 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 SMC3Q9UQE7 1217 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 ZMYM2Q9UBW7 1377 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 CLUHO75153 1309 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 MYH15Q9Y2K3 1946 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 ZNF292O60281 2723 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 ANK1P16157 1881 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 CARNS1A5YM72 827 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 KLHL33A6NCF5 533 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 GOLGA6L4A6NEF3 574 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 CCDC169A6NNP5 214 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 A6NNZ2 444 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 THP07101 528 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 MUTP22033 750 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 PROZP22891 400 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 TKTP29401 623 aaKnown RBP8.86□□□□□ -0.99
HDAC6-234ENST00000493923 RDXP35241 583 aaKnown RBP8.86□□□□□ -0.99
HDAC6-234ENST00000493923 CLCNKBP51801 687 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 ATP2C1P98194 919 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-234ENST00000493923 MTMR3Q13615 1198 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 PSMD5Q16401 504 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 TMEM132AQ24JP5 1023 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 TUBB8Q3ZCM7 444 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 ANO6Q4KMQ2 910 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 HSP90B2PQ58FF3 399 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 ARSHQ5FYA8 562 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 HAUS3Q68CZ6 603 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 ALKAL1Q6UXT8 129 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 GBP6Q6ZN66 633 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 HDXQ7Z353 690 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 CEP57Q86XR8 500 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 REXO1L1PQ8IX06 675 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 FAM71BQ8TC56 605 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 PIK3R5Q8WYR1 880 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 SMG7Q92540 1137 aaKnown RBP8.86□□□□□ -0.99
HDAC6-234ENST00000493923 KIFAP3Q92845 792 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 C18orf25Q96B23 403 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-234ENST00000493923 TTPALQ9BTX7 342 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 RPP25Q9BUL9 199 aaKnown RBP8.86□□□□□ -0.99
HDAC6-234ENST00000493923 NAT10Q9H0A0 1025 aaKnown RBP8.86□□□□□ -0.99
HDAC6-234ENST00000493923 CLSTN2Q9H4D0 955 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 KCNK12Q9HB15 430 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 WDR6Q9NNW5 1121 aaKnown RBP8.86□□□□□ -0.99
HDAC6-234ENST00000493923 HCFC1R1Q9NWW0 138 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 FNIP2Q9P278 1114 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 FBXW11Q9UKB1 542 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 TNFSF13BQ9Y275 285 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 USTQ9Y2C2 406 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 F5P12259 2224 aa8.86□□□□□ -0.99
HDAC6-234ENST00000493923 SMIM28A0A1B0GU29 152 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 CCDC189A1A4V9 331 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 KRBA1A5PL33 1030 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 VWA3AA6NCI4 1184 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 H0Y858 1186 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 K7ERI5 159 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 CCL16O15467 120 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 ZSCAN12O43309 604 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 ZMYND10O75800 440 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 HARSP12081 509 aaKnown RBP8.85□□□□□ -0.99
HDAC6-234ENST00000493923 FGFR3P22607 806 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 GBP2P32456 591 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-234ENST00000493923 PRPHP41219 470 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 ZNF165P49910 485 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 MNAT1P51948 309 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 SLC12A3P55017 1021 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 ETF1P62495 437 aaKnown RBP8.85□□□□□ -0.99
HDAC6-234ENST00000493923 CCZ1BP86790 482 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 CCZ1P86791 482 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-234ENST00000493923 STX1AQ16623 288 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 DCAF4L1Q3SXM0 396 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 TMEM119Q4V9L6 283 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 XKR4Q5GH76 650 aa8.85□□□□□ -0.99
HDAC6-234ENST00000493923 ZBTB41Q5SVQ8 909 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms