RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 SOX5P35711 763 aa5.73□□□□□ -1.49
SMC4-223ENST00000493695 SOX10P56693 466 aa5.73□□□□□ -1.49
SMC4-223ENST00000493695 CLUL1Q15846 466 aa5.73□□□□□ -1.49
SMC4-223ENST00000493695 KIAA0895LQ68EN5 471 aa5.73□□□□□ -1.49
SMC4-223ENST00000493695 ZNF425Q6IV72 752 aa5.73□□□□□ -1.49
SMC4-223ENST00000493695 C1QL2Q7Z5L3 287 aa5.73□□□□□ -1.49
SMC4-223ENST00000493695 CAMKK1Q8N5S9 505 aa5.73□□□□□ -1.49
SMC4-223ENST00000493695 Q8NA96 180 aa5.73□□□□□ -1.49
SMC4-223ENST00000493695 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.73□□□□□ -1.49
SMC4-223ENST00000493695 ORAI2Q96SN7 254 aa5.73□□□□□ -1.49
SMC4-223ENST00000493695 PACSIN1Q9BY11 444 aa5.73□□□□□ -1.49
SMC4-223ENST00000493695 IMPG2Q9BZV3 1241 aa5.73□□□□□ -1.49
SMC4-223ENST00000493695 SLKQ9H2G2 1235 aaPredicted RBP5.73□□□□□ -1.49
SMC4-223ENST00000493695 NEU2Q9Y3R4 380 aa5.73□□□□□ -1.49
SMC4-223ENST00000493695 GRM6O15303 877 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 IGSF3O75054 1194 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 TTLL1O95922 423 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 BMP15O95972 392 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 ELFN1P0C7U0 828 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 MTHFD1P11586 935 aaKnown RBP5.72□□□□□ -1.49
SMC4-223ENST00000493695 ITPKBP27987 946 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 GPR3P46089 330 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 FAPQ12884 760 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 DYRK1AQ13627 763 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 TXNRD1Q16881 649 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 SUMO4Q6EEV6 95 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 AMOTL1Q8IY63 956 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 SLC17A8Q8NDX2 589 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 FBXO41Q8TF61 875 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 NRG4Q8WWG1 115 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 CAAP1Q9H8G2 361 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 TDP1Q9NUW8 608 aa5.72□□□□□ -1.49
SMC4-223ENST00000493695 WIPF3A6NGB9 483 aa5.71□□□□□ -1.5
SMC4-223ENST00000493695 PROM1O43490 865 aa5.71□□□□□ -1.5
SMC4-223ENST00000493695 CTXN1P60606 82 aa5.71□□□□□ -1.5
SMC4-223ENST00000493695 STAT4Q14765 748 aa5.71□□□□□ -1.5
SMC4-223ENST00000493695 PTPRRQ15256 657 aa5.71□□□□□ -1.5
SMC4-223ENST00000493695 LLGL1Q15334 1064 aa5.71□□□□□ -1.5
SMC4-223ENST00000493695 DACT2Q5SW24 774 aa5.71□□□□□ -1.5
SMC4-223ENST00000493695 MIGA2Q7L4E1 593 aa5.71□□□□□ -1.5
SMC4-223ENST00000493695 ADGRG5Q8IZF4 528 aa5.71□□□□□ -1.5
SMC4-223ENST00000493695 CHAC2Q8WUX2 184 aa5.71□□□□□ -1.5
SMC4-223ENST00000493695 NRIP3Q9NQ35 241 aa5.71□□□□□ -1.5
SMC4-223ENST00000493695 SAP30BPQ9UHR5 308 aaKnown RBP5.71□□□□□ -1.5
SMC4-223ENST00000493695 GPR45Q9Y5Y3 372 aa5.71□□□□□ -1.5
SMC4-223ENST00000493695 WASHC2AQ641Q2 1341 aa5.71□□□□□ -1.5
SMC4-223ENST00000493695 CCDC195A0A1B0GUA6 201 aa5.7□□□□□ -1.5
SMC4-223ENST00000493695 URI1O94763 535 aaPredicted RBP5.7□□□□□ -1.5
SMC4-223ENST00000493695 EBLN1P0CF75 366 aa5.7□□□□□ -1.5
SMC4-223ENST00000493695 PRR35P0CG20 571 aa5.7□□□□□ -1.5
SMC4-223ENST00000493695 NR2F6P10588 404 aa5.7□□□□□ -1.5
SMC4-223ENST00000493695 CPEP16870 476 aa5.7□□□□□ -1.5
SMC4-223ENST00000493695 SLC6A4P31645 630 aa5.7□□□□□ -1.5
SMC4-223ENST00000493695 ATP8B2P98198 1209 aa5.7□□□□□ -1.5
SMC4-223ENST00000493695 MC2RQ01718 297 aa5.7□□□□□ -1.5
SMC4-223ENST00000493695 PIGFQ07326 219 aa5.7□□□□□ -1.5
SMC4-223ENST00000493695 SLC10A2Q12908 348 aaPredicted RBP5.7□□□□□ -1.5
SMC4-223ENST00000493695 AOPEPQ8N6M6 819 aa5.7□□□□□ -1.5
SMC4-223ENST00000493695 ZBTB9Q96C00 473 aa5.7□□□□□ -1.5
SMC4-223ENST00000493695 PCDHA13Q9Y5I0 950 aa5.7□□□□□ -1.5
SMC4-223ENST00000493695 GCOM1H8Y6P7 765 aaPredicted RBP5.69□□□□□ -1.5
SMC4-223ENST00000493695 SBK3P0C264 359 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 KELP23276 732 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 CNGA1P29973 690 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 MTNR1BP49286 362 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 ANXA11P50995 505 aaKnown RBP5.69□□□□□ -1.5
SMC4-223ENST00000493695 ITIH3Q06033 890 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 EIF2B5Q13144 721 aaKnown RBP5.69□□□□□ -1.5
SMC4-223ENST00000493695 PABPC1LQ4VXU2 614 aaKnown RBP5.69□□□□□ -1.5
SMC4-223ENST00000493695 ZNF626Q68DY1 528 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 SLC30A10Q6XR72 485 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 DCBLD1Q8N8Z6 715 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 Q8N9P0 234 aaPredicted RBP5.69□□□□□ -1.5
SMC4-223ENST00000493695 C9orf106Q8NAJ2 232 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 KLHL32Q96NJ5 620 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 TPSD1Q9BZJ3 242 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 CTTNBP2NLQ9P2B4 639 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 ADAM21Q9UKJ8 722 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 AOX1Q06278 1338 aa5.69□□□□□ -1.5
SMC4-223ENST00000493695 F5H697 171 aa5.68□□□□□ -1.5
SMC4-223ENST00000493695 PRKD3O94806 890 aa5.68□□□□□ -1.5
SMC4-223ENST00000493695 SUN1O94901 812 aa5.68□□□□□ -1.5
SMC4-223ENST00000493695 HNRNPCP07910 306 aaKnown RBP eCLIP5.68□□□□□ -1.5
SMC4-223ENST00000493695 NPTX2P47972 431 aa5.68□□□□□ -1.5
SMC4-223ENST00000493695 CCT8P50990 548 aa5.68□□□□□ -1.5
SMC4-223ENST00000493695 NXPH1P58417 271 aa5.68□□□□□ -1.5
SMC4-223ENST00000493695 GADL1Q6ZQY3 521 aa5.68□□□□□ -1.5
SMC4-223ENST00000493695 CFAP52Q8N1V2 620 aa5.68□□□□□ -1.5
SMC4-223ENST00000493695 FCRL4Q96PJ5 515 aa5.68□□□□□ -1.5
SMC4-223ENST00000493695 KLC4Q9NSK0 619 aa5.68□□□□□ -1.5
SMC4-223ENST00000493695 ZNF804BA4D1E1 1349 aa5.68□□□□□ -1.5
SMC4-223ENST00000493695 LINC01548A6NM66 108 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 ENPP3O14638 875 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 CD1AP06126 327 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 IGKV2-30P06310 120 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 RHOP08100 348 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 MPGP29372 298 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 PTGER1P34995 402 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 HNRNPMP52272 730 aaKnown RBP eCLIP5.67□□□□□ -1.5
SMC4-223ENST00000493695 MAPK7Q13164 816 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms