RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 REEP2Q9BRK0 252 aa21.08■□□□□ 0.96
RNF40-203ENST00000493683 TMEM8AQ9HCN3 771 aa21.08■□□□□ 0.96
RNF40-203ENST00000493683 PXDNLA1KZ92 1463 aa21.08■□□□□ 0.96
RNF40-203ENST00000493683 CCDC159P0C7I6 412 aa21.08■□□□□ 0.96
RNF40-203ENST00000493683 MAP3K7CLP57077 242 aa21.08■□□□□ 0.96
RNF40-203ENST00000493683 CYLC2Q14093 348 aaPredicted RBP21.08■□□□□ 0.96
RNF40-203ENST00000493683 KIAA2013Q8IYS2 634 aa21.08■□□□□ 0.96
RNF40-203ENST00000493683 SH2D3CQ8N5H7 860 aa21.08■□□□□ 0.96
RNF40-203ENST00000493683 NYAP2Q9P242 653 aa21.08■□□□□ 0.96
RNF40-203ENST00000493683 TMEM120BA0PK00 339 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 PHF20L1A8MW92 1017 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 RAD51CO43502 376 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 OCM2P0CE71 109 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 OCMP0CE72 109 aaPredicted RBP21.07■□□□□ 0.96
RNF40-203ENST00000493683 ACADSP16219 412 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 NUDT18Q6ZVK8 323 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 IGDCC4Q8TDY8 1250 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 NSL1Q96IY1 281 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 ERGIC2Q96RQ1 377 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 MTMR4Q9NYA4 1195 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 MAP3K4Q9Y6R4 1608 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 SPP2Q13103 211 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 KYNUQ16719 465 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 CLEC4FQ8N1N0 589 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 ASCC2Q9H1I8 757 aaPredicted RBP21.07■□□□□ 0.96
RNF40-203ENST00000493683 POLIQ9UNA4 740 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 WEE2P0C1S8 567 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 PLA2G4AP47712 749 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 RUNX1T1Q06455 604 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 TRIM69Q86WT6 500 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 ALG13Q9NP73 1137 aaKnown RBP21.07■□□□□ 0.96
RNF40-203ENST00000493683 DYRK4Q9NR20 520 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 CD4P01730 458 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 GUCY1A2P33402 732 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 KBTBD12Q3ZCT8 623 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 TMEM117Q9H0C3 514 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 TASP1Q9H6P5 420 aa21.07■□□□□ 0.96
RNF40-203ENST00000493683 KDM6AO15550 1401 aaPredicted RBP21.06■□□□□ 0.96
RNF40-203ENST00000493683 F5H423 210 aaPredicted RBP21.06■□□□□ 0.96
RNF40-203ENST00000493683 PRPF4O43172 522 aaKnown RBP eCLIP21.06■□□□□ 0.96
RNF40-203ENST00000493683 ENO3P13929 434 aaPredicted RBP21.06■□□□□ 0.96
RNF40-203ENST00000493683 FBXW4P57775 412 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 WASHC5Q12768 1159 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 PPIL6Q8IXY8 311 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 NSUN4Q96CB9 384 aaKnown RBP21.06■□□□□ 0.96
RNF40-203ENST00000493683 SCN3BQ9NY72 215 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 AFF4Q9UHB7 1163 aaKnown RBP21.06■□□□□ 0.96
RNF40-203ENST00000493683 HECW2Q9P2P5 1572 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 GOLGA8RI6L899 631 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 CPB1P15086 417 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 SPATA2LQ8IUW3 424 aaPredicted RBP21.06■□□□□ 0.96
RNF40-203ENST00000493683 TMA16Q96EY4 203 aaKnown RBP21.06■□□□□ 0.96
RNF40-203ENST00000493683 ZNF711Q9Y462 761 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 TRPC5OSA6NMA1 111 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 MAGEB2O15479 319 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 CYBBP04839 570 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 ANKS1AQ92625 1134 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 ELMO2Q96JJ3 720 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 CARD9Q9H257 536 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 PALMDQ9NP74 551 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 PDP2Q9P2J9 529 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 IRAK1P51617 712 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 PTK6Q13882 451 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 SNX17Q15036 470 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 PTGISQ16647 500 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 RFX8Q6ZV50 586 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 MANSC1Q9H8J5 431 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 AGPAT5Q9NUQ2 364 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 AGAP1Q9UPQ3 857 aa21.06■□□□□ 0.96
RNF40-203ENST00000493683 E7ENQ6 273 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 H2AFYO75367 372 aaKnown RBP21.05■□□□□ 0.96
RNF40-203ENST00000493683 FXR2P51116 673 aaKnown RBP eCLIP21.05■□□□□ 0.961e-6■■□□□ 13.4
RNF40-203ENST00000493683 TMEM132DQ14C87 1099 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 FAM182BQ5T319 152 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 XRRA1Q6P2D8 792 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 RAD9BQ6WBX8 426 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 CDR2LQ86X02 465 aaPredicted RBP21.05■□□□□ 0.96
RNF40-203ENST00000493683 AGR3Q8TD06 166 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 DTX3LQ8TDB6 740 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 C9orf72Q96LT7 481 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 ZIM3Q96PE6 472 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 RBBP8Q99708 897 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 SELENONQ9NZV5 590 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 NDUFA13Q9P0J0 144 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 NDUFS3O75489 264 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 PHF21AQ96BD5 680 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 PCMTD2Q9NV79 361 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 B2RBV5 119 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 EEF2KO00418 725 aaKnown RBP21.05■□□□□ 0.96
RNF40-203ENST00000493683 MAFGO15525 162 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 RGS4P49798 205 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 TRIP10Q15642 601 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 DCAF4L1Q3SXM0 396 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 MFSD14CQ5VZR4 134 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 TMEM154Q6P9G4 183 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 ATG9AQ7Z3C6 839 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 E2F7Q96AV8 911 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 MCEEQ96PE7 176 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 RIT2Q99578 217 aa21.05■□□□□ 0.96
RNF40-203ENST00000493683 IRX2Q9BZI1 471 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms