RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TEX33O43247 280 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 BRINP1O60477 761 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 IGLV2-14P01704 120 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 CKBP12277 381 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 GSPT1P15170 499 aaKnown RBP4.39□□□□□ -1.71
PTCD3-218ENST00000493430 FGFR4P22455 802 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 ALDH1A3P47895 512 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 ATXN1P54253 815 aaKnown RBP4.39□□□□□ -1.71
PTCD3-218ENST00000493430 SCAND1P57086 179 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 HSD11B2P80365 405 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 SIM1P81133 766 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-218ENST00000493430 FAPQ12884 760 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 NOMO1Q15155 1222 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 ZNF362Q5T0B9 420 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-218ENST00000493430 ZNF529Q6P280 563 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 KCNK18Q7Z418 384 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 THNSL2Q86YJ6 484 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 CMIPQ8IY22 773 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 UBR7Q8N806 425 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 HOXB13Q92826 284 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-218ENST00000493430 PTCD3Q96EY7 689 aaKnown RBP4.39□□□□□ -1.71
PTCD3-218ENST00000493430 ORAI2Q96SN7 254 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 ADI1Q9BV57 179 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 KCNE5Q9UJ90 142 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 AJAP1Q9UKB5 411 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-218ENST00000493430 DMTF1Q9Y222 760 aa4.39□□□□□ -1.71
PTCD3-218ENST00000493430 MTO1Q9Y2Z2 717 aaKnown RBP4.39□□□□□ -1.71
PTCD3-218ENST00000493430 PRDM15P57071 1507 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-218ENST00000493430 MYOM3Q5VTT5 1437 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 NALCNQ8IZF0 1738 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 PLEKHH2Q8IVE3 1493 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 CHD2O14647 1828 aaKnown RBP4.38□□□□□ -1.71
PTCD3-218ENST00000493430 MYADML2A6NDP7 307 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 ENDOD1O94919 500 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 SLC6A2P23975 617 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 MCAMP43121 646 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 MRPS35P82673 323 aaKnown RBP4.38□□□□□ -1.71
PTCD3-218ENST00000493430 PPP3CAQ08209 521 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 MALLQ13021 153 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 TOR2AQ5JU69 321 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 STRA8Q7Z7C7 330 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 COLGALT2Q8IYK4 626 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 CASKIN2Q8WXE0 1202 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 NACC2Q96BF6 587 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 CYFIP2Q96F07 1278 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 AIFM2Q9BRQ8 373 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 LDAHQ9H6V9 325 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 CAAP1Q9H8G2 361 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 SIK3Q9Y2K2 1263 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 SPATA31D1Q6ZQQ2 1576 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 SPAG9O60271 1321 aaKnown RBP4.38□□□□□ -1.71
PTCD3-218ENST00000493430 AATKQ6ZMQ8 1374 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 IFT172Q9UG01 1749 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 PTPRKQ15262 1439 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 UHRF1BP1Q6BDS2 1440 aa4.38□□□□□ -1.71
PTCD3-218ENST00000493430 VWDEQ8N2E2 1590 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 CLTCL1P53675 1640 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 IQGAP3Q86VI3 1631 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 ERN1O75460 977 aaKnown RBP4.37□□□□□ -1.71
PTCD3-218ENST00000493430 PRSS23O95084 383 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 ALAS1P13196 640 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 SOX5P35711 763 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 SLC5A3P53794 718 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 CACNA2D1P54289 1103 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 CYP2A13Q16696 494 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 SEM1Q6ZVN7 128 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 NOP9Q86U38 636 aaKnown RBP4.37□□□□□ -1.71
PTCD3-218ENST00000493430 ARHGEF25Q86VW2 580 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 ZNF384Q8TF68 577 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 SLKQ9H2G2 1235 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-218ENST00000493430 UNKLQ9H9P5 680 aaKnown RBP4.37□□□□□ -1.71
PTCD3-218ENST00000493430 DMRT3Q9NQL9 472 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 SEMA4GQ9NTN9 838 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 FBXO34Q9NWN3 711 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 DNAJC28Q9NX36 388 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 FOXJ2Q9P0K8 574 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 CFDP1Q9UEE9 299 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-218ENST00000493430 SLC23A1Q9UHI7 598 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 USP25Q9UHP3 1055 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 ABCC5O15440 1437 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 DAPK1P53355 1430 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 FGD6Q6ZV73 1430 aa4.37□□□□□ -1.71
PTCD3-218ENST00000493430 EFCAB6Q5THR3 1501 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 NRXN3Q9Y4C0 1643 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 PPLO60437 1756 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 CCDC78A2IDD5 438 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 INO80B-WBP1J3KQ70 363 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 FPR1P21462 350 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 VAV2P52735 878 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 SRSF2Q01130 221 aaKnown RBP4.36□□□□□ -1.71
PTCD3-218ENST00000493430 NHLH1Q02575 133 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 GGT6Q6P531 493 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 UBE3BQ7Z3V4 1068 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 FITM2Q8N6M3 262 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.36□□□□□ -1.71
PTCD3-218ENST00000493430 ACTRT2Q8TDY3 377 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 MARS2Q96GW9 593 aaKnown RBP4.36□□□□□ -1.71
PTCD3-218ENST00000493430 PDLIM2Q96JY6 352 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 MED15Q96RN5 788 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 PNKPQ96T60 521 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms