RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 MFSD1Q9H3U5 465 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 TMEM206Q9H813 350 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 CYP4F11Q9HBI6 524 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 SLC2A4RGQ9NR83 387 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 KBTBD4Q9NVX7 518 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 GDE1Q9NZC3 331 aa12.46□□□□□ -0.41
LRTM1-202ENST00000493075 ZNF197O14709 1029 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 NARSO43776 548 aaKnown RBP12.45□□□□□ -0.42
LRTM1-202ENST00000493075 SEC24AO95486 1093 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 F13A1P00488 732 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 RHOP08100 348 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 NPR3P17342 541 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 GARTP22102 1010 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 GUCY2FP51841 1108 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 ADCY1Q08828 1119 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 KCNA1Q09470 495 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 TCF15Q12870 199 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 GPR17Q13304 367 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 MYBPC2Q14324 1141 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 STXBP4Q6ZWJ1 553 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 MTSS1LQ765P7 747 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 PDILTQ8N807 584 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 KCNG4Q8TDN1 519 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 SENP8Q96LD8 212 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 HCFC1R1Q9NWW0 138 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 TBC1D7Q9P0N9 293 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 FBXL21Q9UKT6 434 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 CFAP45Q9UL16 551 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 MRPS23Q9Y3D9 190 aaKnown RBP12.45□□□□□ -0.42
LRTM1-202ENST00000493075 INSL5Q9Y5Q6 135 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 NUMBLQ9Y6R0 609 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 PLXNA3P51805 1871 aa12.45□□□□□ -0.42
LRTM1-202ENST00000493075 PPEF2O14830 753 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 KIAA0391O15091 583 aaKnown RBP12.44□□□□□ -0.42
LRTM1-202ENST00000493075 GALR2O43603 387 aaPredicted RBP12.44□□□□□ -0.42
LRTM1-202ENST00000493075 CYP11A1P05108 521 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 NFICP08651 508 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 ODC1P11926 461 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 CASP5P51878 434 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 OVOS1Q6IE37 1185 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 IQCEQ6IPM2 695 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 SHC4Q6S5L8 630 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 PARM1Q6UWI2 310 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 NPAS3Q8IXF0 933 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 SYCP3Q8IZU3 236 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 SIX5Q8N196 739 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 ELMOD1Q8N336 334 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 TMEM130Q8N3G9 435 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 TMEM105Q8N8V8 129 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 LEMD2Q8NC56 503 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 FGF14Q92915 247 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 ZNF512Q96ME7 567 aaPredicted RBP12.44□□□□□ -0.42
LRTM1-202ENST00000493075 RTP3Q9BQQ7 232 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 TRIM9Q9C026 710 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 MAGEF1Q9HAY2 307 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 DPP3Q9NY33 737 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 HSFX1Q9UBD0 423 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 DSEQ9UL01 958 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 TIMM13Q9Y5L4 95 aaPredicted RBP12.44□□□□□ -0.42
LRTM1-202ENST00000493075 DENND4AQ7Z401 1863 aa12.44□□□□□ -0.42
LRTM1-202ENST00000493075 SPTLC1O15269 473 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 EXTL3O43909 919 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 CFHP08603 1231 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 CPB1P15086 417 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 AOC1P19801 751 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 EPHA5P54756 1037 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 PLD1Q13393 1074 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 PRSS36Q5K4E3 855 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 CYP4A22Q5TCH4 519 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 PHLDB3Q6NSJ2 640 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 ARMCX5Q6P1M9 558 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 RNF19BQ6ZMZ0 732 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 BRSK2Q8IWQ3 736 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 CACTINQ8WUQ7 758 aaKnown RBP12.43□□□□□ -0.42
LRTM1-202ENST00000493075 BORCS6Q96GS4 357 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 C7orf25Q9BPX7 421 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 FAM213AQ9BRX8 229 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 RPP25Q9BUL9 199 aaKnown RBP12.43□□□□□ -0.42
LRTM1-202ENST00000493075 IKZF4Q9H2S9 585 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 RCOR1Q9UKL0 485 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 GTF3C3Q9Y5Q9 886 aa12.43□□□□□ -0.42
LRTM1-202ENST00000493075 KRBA1A5PL33 1030 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 ECI2O75521 394 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 PRPF6O94906 941 aaKnown RBP12.42□□□□□ -0.42
LRTM1-202ENST00000493075 PNPLA4P41247 253 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 TAF6P49848 677 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 TWF1Q12792 350 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 SLC5A9Q2M3M2 681 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 FOXD4L5Q5VV16 416 aaPredicted RBP12.42□□□□□ -0.42
LRTM1-202ENST00000493075 CWF19L1Q69YN2 538 aaKnown RBP12.42□□□□□ -0.42
LRTM1-202ENST00000493075 CENPPQ6IPU0 288 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 PDZD4Q76G19 769 aaPredicted RBP12.42□□□□□ -0.42
LRTM1-202ENST00000493075 EFCAB13Q8IY85 973 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 FLCNQ8NFG4 579 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 GPR152Q8TDT2 470 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 FOXD4L4Q8WXT5 416 aaPredicted RBP12.42□□□□□ -0.42
LRTM1-202ENST00000493075 DHX58Q96C10 678 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 CORO1BQ9BR76 489 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 PYM1Q9BRP8 204 aaKnown RBP12.42□□□□□ -0.42
LRTM1-202ENST00000493075 FGFBP2Q9BYJ0 223 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms