RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 FLT3P36888 993 aa22.49■■□□□ 1.19
CCDC88B-208ENST00000492980 C1QBPQ07021 282 aaKnown RBP22.49■■□□□ 1.19
CCDC88B-208ENST00000492980 FAM187BQ17R55 369 aa22.49■■□□□ 1.19
CCDC88B-208ENST00000492980 PPP1R2P3Q6NXS1 205 aa22.49■■□□□ 1.19
CCDC88B-208ENST00000492980 TTC27Q6P3X3 843 aa22.49■■□□□ 1.19
CCDC88B-208ENST00000492980 MMS22LQ6ZRQ5 1243 aa22.49■■□□□ 1.19
CCDC88B-208ENST00000492980 TMEM192Q8IY95 271 aa22.49■■□□□ 1.19
CCDC88B-208ENST00000492980 FAM76AQ8TAV0 307 aa22.49■■□□□ 1.19
CCDC88B-208ENST00000492980 MAGOHBQ96A72 148 aaKnown RBP22.49■■□□□ 1.19
CCDC88B-208ENST00000492980 LRRC45Q96CN5 670 aa22.49■■□□□ 1.19
CCDC88B-208ENST00000492980 TRIM31Q9BZY9 425 aa22.49■■□□□ 1.19
CCDC88B-208ENST00000492980 XYLT2Q9H1B5 865 aa22.49■■□□□ 1.19
CCDC88B-208ENST00000492980 CISHQ9NSE2 258 aa22.49■■□□□ 1.19
CCDC88B-208ENST00000492980 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 MAGEB2O15479 319 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 KRT14P02533 472 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 CD58P19256 250 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 HSD17B3P37058 310 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 UAP1Q16222 522 aaPredicted RBP22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 ZNF699Q32M78 642 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 PLEKHA7Q6IQ23 1121 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 ANKRD36BP1Q96IX9 119 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 C16orf70Q9BSU1 422 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 ZHX1Q9UKY1 873 aaPredicted RBP22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 COL1A2P08123 1366 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 GPR25O00155 361 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 PROSCO94903 275 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 TNNC2P02585 160 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 CXCL8P10145 99 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 RARAP10276 462 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 MAMLD1Q13495 774 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 AMHR2Q16671 573 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 IFNLR1Q8IU57 520 aaPredicted RBP22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 RPF1Q9H9Y2 349 aaKnown RBP22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 RASAL2Q9UJF2 1139 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 MTUS1Q9ULD2 1270 aa22.48■■□□□ 1.19
CCDC88B-208ENST00000492980 A0A087WZ62 844 aa22.47■■□□□ 1.19
CCDC88B-208ENST00000492980 IL18RAPO95256 599 aa22.47■■□□□ 1.19
CCDC88B-208ENST00000492980 ASPAP45381 313 aa22.47■■□□□ 1.19
CCDC88B-208ENST00000492980 GPR162Q16538 588 aa22.47■■□□□ 1.19
CCDC88B-208ENST00000492980 GPR142Q7Z601 462 aa22.47■■□□□ 1.19
CCDC88B-208ENST00000492980 FDXACB1Q9BRP7 624 aaPredicted RBP22.47■■□□□ 1.19
CCDC88B-208ENST00000492980 MRPL47Q9HD33 250 aaKnown RBP22.47■■□□□ 1.19
CCDC88B-208ENST00000492980 PLAAQ9Y263 795 aa22.47■■□□□ 1.19
CCDC88B-208ENST00000492980 CAPN2P17655 700 aa22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 CCDC137Q6PK04 289 aaKnown RBP22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 C12orf50Q8NA57 414 aaPredicted RBP22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 PPP1R16BQ96T49 567 aa22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 PLVAPQ9BX97 442 aa22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 SCINQ9Y6U3 715 aa22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 CSDE1O75534 798 aaKnown RBP22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 BRD2P25440 801 aaKnown RBP22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 DRG2P55039 364 aaKnown RBP22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 GRB14Q14449 540 aa22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 SCARA5Q6ZMJ2 495 aa22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 TMC3Q7Z5M5 1100 aa22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 ZDHHC18Q9NUE0 388 aa22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 AKT3Q9Y243 479 aa22.46■■□□□ 1.19
CCDC88B-208ENST00000492980 FSCN2O14926 492 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 WEE2P0C1S8 567 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 MMP8P22894 467 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 COILP38432 576 aaPredicted RBP22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 LRIG3Q6UXM1 1119 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 DDX27Q96GQ7 796 aaKnown RBP22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 PDZD7Q9H5P4 517 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 SRCAPQ6ZRS2 3230 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 MEFVO15553 781 aaPredicted RBP22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 PPFIA4O75335 1185 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 LSM8O95777 96 aaKnown RBP22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 VTNP04004 478 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 NFICP08651 508 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 MCF2P10911 925 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 FKBP1BP68106 108 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 ZNF394Q53GI3 561 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 MTHFD1LQ6UB35 978 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 DPP9Q86TI2 863 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 MAML3Q96JK9 1138 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 RUNDC3BQ96NL0 473 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 FMO2Q99518 471 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 GBA2Q9HCG7 927 aaPredicted RBP22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 SIX4Q9UIU6 781 aa22.45■■□□□ 1.18
CCDC88B-208ENST00000492980 H0YGN5 161 aa22.44■■□□□ 1.18
CCDC88B-208ENST00000492980 STAG3L1P0CL83 205 aa22.44■■□□□ 1.18
CCDC88B-208ENST00000492980 SMPD1P17405 629 aa22.44■■□□□ 1.18
CCDC88B-208ENST00000492980 FNTAP49354 379 aa22.44■■□□□ 1.18
CCDC88B-208ENST00000492980 MTMR3Q13615 1198 aa22.44■■□□□ 1.18
CCDC88B-208ENST00000492980 DAB2IPQ5VWQ8 1189 aa22.44■■□□□ 1.18
CCDC88B-208ENST00000492980 SMYD5Q6GMV2 418 aa22.44■■□□□ 1.18
CCDC88B-208ENST00000492980 PARVAQ9NVD7 372 aa22.44■■□□□ 1.18
CCDC88B-208ENST00000492980 POLIQ9UNA4 740 aa22.44■■□□□ 1.18
CCDC88B-208ENST00000492980 SNX24Q9Y343 169 aa22.44■■□□□ 1.18
CCDC88B-208ENST00000492980 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.44■■□□□ 1.18
CCDC88B-208ENST00000492980 NFS1Q9Y697 457 aa22.44■■□□□ 1.18
CCDC88B-208ENST00000492980 LACTBL1A8MY62 500 aa22.43■■□□□ 1.18
CCDC88B-208ENST00000492980 H3BRB1 525 aa22.43■■□□□ 1.18
CCDC88B-208ENST00000492980 PODXLO00592 558 aa22.43■■□□□ 1.18
CCDC88B-208ENST00000492980 TNFAIP2Q03169 654 aa22.43■■□□□ 1.18
CCDC88B-208ENST00000492980 ZDHHC24Q6UX98 284 aa22.43■■□□□ 1.18
CCDC88B-208ENST00000492980 C1orf131Q8NDD1 294 aaKnown RBP22.43■■□□□ 1.18
CCDC88B-208ENST00000492980 FEZF2Q8TBJ5 459 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms