RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 PABPC1LQ4VXU2 614 aaKnown RBP25.64■■□□□ 1.7
CTDSP1-211ENST00000492545 C9orf57Q5W0N0 161 aa25.64■■□□□ 1.7
CTDSP1-211ENST00000492545 CRELD2Q6UXH1 353 aaPredicted RBP25.64■■□□□ 1.7
CTDSP1-211ENST00000492545 SLC44A3Q8N4M1 653 aa25.64■■□□□ 1.7
CTDSP1-211ENST00000492545 CYP4F11Q9HBI6 524 aa25.64■■□□□ 1.7
CTDSP1-211ENST00000492545 RCOR1Q9UKL0 485 aa25.64■■□□□ 1.7
CTDSP1-211ENST00000492545 ODC1P11926 461 aa25.63■■□□□ 1.69
CTDSP1-211ENST00000492545 PTPN2P17706 415 aa25.63■■□□□ 1.69
CTDSP1-211ENST00000492545 CASP5P51878 434 aa25.63■■□□□ 1.69
CTDSP1-211ENST00000492545 FOXD4L6Q3SYB3 417 aaPredicted RBP25.63■■□□□ 1.69
CTDSP1-211ENST00000492545 FOXD4L3Q6VB84 417 aaPredicted RBP25.63■■□□□ 1.69
CTDSP1-211ENST00000492545 C7orf25Q9BPX7 421 aa25.63■■□□□ 1.69
CTDSP1-211ENST00000492545 DNMT3BQ9UBC3 853 aaKnown RBP25.63■■□□□ 1.69
CTDSP1-211ENST00000492545 DSEQ9UL01 958 aa25.63■■□□□ 1.69
CTDSP1-211ENST00000492545 PCDHA7Q9UN72 937 aa25.63■■□□□ 1.69
CTDSP1-211ENST00000492545 POLR2DO15514 142 aaKnown RBP25.62■■□□□ 1.69
CTDSP1-211ENST00000492545 AVPR2P30518 371 aa25.62■■□□□ 1.69
CTDSP1-211ENST00000492545 GUCY2FP51841 1108 aa25.62■■□□□ 1.69
CTDSP1-211ENST00000492545 NTHL1P78549 312 aa25.62■■□□□ 1.69
CTDSP1-211ENST00000492545 PKP1Q13835 747 aa25.62■■□□□ 1.69
CTDSP1-211ENST00000492545 MYBPC2Q14324 1141 aa25.62■■□□□ 1.69
CTDSP1-211ENST00000492545 FGF13Q92913 245 aa25.62■■□□□ 1.69
CTDSP1-211ENST00000492545 FAM213AQ9BRX8 229 aa25.62■■□□□ 1.69
CTDSP1-211ENST00000492545 IKZF4Q9H2S9 585 aa25.62■■□□□ 1.69
CTDSP1-211ENST00000492545 SMOC2Q9H3U7 446 aa25.62■■□□□ 1.69
CTDSP1-211ENST00000492545 DPP3Q9NY33 737 aa25.62■■□□□ 1.69
CTDSP1-211ENST00000492545 WNT16Q9UBV4 365 aa25.62■■□□□ 1.69
CTDSP1-211ENST00000492545 EXTL3O43909 919 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 SRFP11831 508 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 CPB1P15086 417 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 ASIC1P78348 528 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 HTR4Q13639 388 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 RESP18Q5W5W9 173 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 OVOS1Q6IE37 1185 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 MTSS1LQ765P7 747 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 ELMOD1Q8N336 334 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 SPRYD3Q8NCJ5 442 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 CACTINQ8WUQ7 758 aaKnown RBP25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 SENP8Q96LD8 212 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 MFSD1Q9H3U5 465 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 GDE1Q9NZC3 331 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 INSL5Q9Y5Q6 135 aa25.61■■□□□ 1.69
CTDSP1-211ENST00000492545 DOCK8Q8NF50 2099 aa25.6■■□□□ 1.69
CTDSP1-211ENST00000492545 MICAL2O94851 1124 aa25.6■■□□□ 1.69
CTDSP1-211ENST00000492545 PRPF6O94906 941 aaKnown RBP25.6■■□□□ 1.69
CTDSP1-211ENST00000492545 CYP11A1P05108 521 aa25.6■■□□□ 1.69
CTDSP1-211ENST00000492545 RHOP08100 348 aa25.6■■□□□ 1.69
CTDSP1-211ENST00000492545 CLCN5P51795 746 aa25.6■■□□□ 1.69
CTDSP1-211ENST00000492545 DNM1Q05193 864 aaKnown RBP25.6■■□□□ 1.69
CTDSP1-211ENST00000492545 ADCY1Q08828 1119 aa25.6■■□□□ 1.69
CTDSP1-211ENST00000492545 GPR17Q13304 367 aa25.6■■□□□ 1.69
CTDSP1-211ENST00000492545 BRSK2Q8IWQ3 736 aa25.6■■□□□ 1.69
CTDSP1-211ENST00000492545 FBXL21Q9UKT6 434 aa25.6■■□□□ 1.69
CTDSP1-211ENST00000492545 MRPS23Q9Y3D9 190 aaKnown RBP25.6■■□□□ 1.69
CTDSP1-211ENST00000492545 TIMM13Q9Y5L4 95 aaPredicted RBP25.6■■□□□ 1.69
CTDSP1-211ENST00000492545 ZNF197O14709 1029 aa25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 PPEF2O14830 753 aa25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 EIF3DO15371 548 aaKnown RBP eCLIP25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 SEC24AO95486 1093 aa25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 PNPLA4P41247 253 aa25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 TAF6P49848 677 aa25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 IQCEQ6IPM2 695 aa25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 ARMCX5Q6P1M9 558 aa25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 LEMD2Q8NC56 503 aa25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 ITFG1Q8TB96 612 aa25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 RSAD2Q8WXG1 361 aa25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 IRF2BPLQ9H1B7 796 aa25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 HCFC1R1Q9NWW0 138 aa25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 RBAKQ9NYW8 714 aaPredicted RBP25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 MYH15Q9Y2K3 1946 aa25.59■■□□□ 1.69
CTDSP1-211ENST00000492545 PIEZO1Q92508 2521 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 WDFY4Q6ZS81 3184 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 PVALEFA0A1B0GWK0 134 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 SPTLC1O15269 473 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 SNRPFP62306 86 aaKnown RBP25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 PLD1Q13393 1074 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 ASTLQ6HA08 431 aaPredicted RBP25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 RNF19BQ6ZMZ0 732 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 UNC13DQ70J99 1090 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 METTL23Q86XA0 190 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 TMEM130Q8N3G9 435 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 SAAL1Q96ER3 474 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 ZNF512Q96ME7 567 aaPredicted RBP25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 CBWD1Q9BRT8 395 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 FGFBP2Q9BYJ0 223 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 KIAA1586Q9HCI6 787 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 HSFX1Q9UBD0 423 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 NUMBLQ9Y6R0 609 aa25.58■■□□□ 1.69
CTDSP1-211ENST00000492545 PDGFBP01127 241 aaPredicted RBP25.57■■□□□ 1.68
CTDSP1-211ENST00000492545 PTPN5P54829 565 aa25.57■■□□□ 1.68
CTDSP1-211ENST00000492545 VCPP55072 806 aaKnown RBP25.57■■□□□ 1.68
CTDSP1-211ENST00000492545 FAM26FQ5R3K3 315 aa25.57■■□□□ 1.68
CTDSP1-211ENST00000492545 IER5LQ5T953 404 aa25.57■■□□□ 1.68
CTDSP1-211ENST00000492545 CYP4A22Q5TCH4 519 aa25.57■■□□□ 1.68
CTDSP1-211ENST00000492545 NPAS3Q8IXF0 933 aa25.57■■□□□ 1.68
CTDSP1-211ENST00000492545 EFCAB13Q8IY85 973 aa25.57■■□□□ 1.68
CTDSP1-211ENST00000492545 GPD1LQ8N335 351 aa25.57■■□□□ 1.68
CTDSP1-211ENST00000492545 ZNF507Q8TCN5 953 aa25.57■■□□□ 1.68
CTDSP1-211ENST00000492545 ZNF560Q96MR9 790 aa25.57■■□□□ 1.68
CTDSP1-211ENST00000492545 SLC2A4RGQ9NR83 387 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms