RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SCP2P22307 547 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 ADSSP30520 456 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 MATR3P43243 847 aaKnown RBP eCLIP10.15□□□□□ -0.78
BRCA1-219ENST00000491747 KRT17Q04695 432 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 SOX4Q06945 474 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-219ENST00000491747 DPYDQ12882 1025 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 PLPP4Q5VZY2 271 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 DDX53Q86TM3 631 aaKnown RBP10.15□□□□□ -0.78
BRCA1-219ENST00000491747 RBM23Q86U06 439 aaKnown RBP10.15□□□□□ -0.78
BRCA1-219ENST00000491747 SLC35F6Q8N357 371 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 ZSWIM2Q8NEG5 633 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 AUTS2Q8WXX7 1259 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 TMEM169Q96HH4 297 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 SNX27Q96L92 541 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 ACAP3Q96P50 834 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 TCF25Q9BQ70 676 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 PYM1Q9BRP8 204 aaKnown RBP10.15□□□□□ -0.78
BRCA1-219ENST00000491747 GOLGA2P5Q9HBQ8 144 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 VPS18Q9P253 973 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 FEZ2Q9UHY8 353 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-219ENST00000491747 STYXL1Q9Y6J8 313 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 VWA8A3KMH1 1905 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.15□□□□□ -0.79
BRCA1-219ENST00000491747 CASTOR2A6NHX0 329 aa10.15□□□□□ -0.79
BRCA1-219ENST00000491747 PER2O15055 1255 aa10.15□□□□□ -0.79
BRCA1-219ENST00000491747 CXCL8P10145 99 aa10.15□□□□□ -0.79
BRCA1-219ENST00000491747 CD44P16070 742 aaKnown RBP10.15□□□□□ -0.79
BRCA1-219ENST00000491747 TUSC3Q13454 348 aa10.15□□□□□ -0.79
BRCA1-219ENST00000491747 CYP26C1Q6V0L0 522 aa10.15□□□□□ -0.79
BRCA1-219ENST00000491747 UNC13DQ70J99 1090 aa10.15□□□□□ -0.79
BRCA1-219ENST00000491747 EPM2AIP1Q7L775 607 aaPredicted RBP10.15□□□□□ -0.79
BRCA1-219ENST00000491747 APBB1IPQ7Z5R6 666 aaPredicted RBP10.15□□□□□ -0.79
BRCA1-219ENST00000491747 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.15□□□□□ -0.79
BRCA1-219ENST00000491747 VPS52Q8N1B4 723 aa10.15□□□□□ -0.79
BRCA1-219ENST00000491747 SLC17A8Q8NDX2 589 aa10.15□□□□□ -0.79
BRCA1-219ENST00000491747 MICAL1Q8TDZ2 1067 aa10.15□□□□□ -0.79
BRCA1-219ENST00000491747 HVCN1Q96D96 273 aa10.15□□□□□ -0.79
BRCA1-219ENST00000491747 PNKPQ96T60 521 aa10.15□□□□□ -0.79
BRCA1-219ENST00000491747 ZBP1Q9H171 429 aa10.15□□□□□ -0.79
BRCA1-219ENST00000491747 IGFLR1Q9H665 355 aa10.15□□□□□ -0.79
BRCA1-219ENST00000491747 PLXNA3P51805 1871 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 PPP1R3GB7ZBB8 358 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 LTBRP36941 435 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 GYS2P54840 703 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 COL19A1Q14993 1142 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 CD300LGQ6UXG3 332 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 TMC7Q7Z402 723 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 RNF168Q8IYW5 571 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-219ENST00000491747 C18orf25Q96B23 403 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-219ENST00000491747 ACCSQ96QU6 501 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 MSTO1Q9BUK6 570 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 ABCB6Q9NP58 842 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 ENTPD7Q9NQZ7 604 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 ABHD10Q9NUJ1 306 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 CNTN3Q9P232 1028 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 PCDHB13Q9Y5F0 798 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 TCF20Q9UGU0 1960 aaKnown RBP10.14□□□□□ -0.79
BRCA1-219ENST00000491747 LRRC10BA6NIK2 292 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 OGTO15294 1046 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 NRIP1P48552 1158 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 ACOT2P49753 483 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 YARSP54577 528 aaKnown RBP10.14□□□□□ -0.79
BRCA1-219ENST00000491747 DLX2Q07687 328 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-219ENST00000491747 ENOX2Q16206 610 aaKnown RBP10.14□□□□□ -0.79
BRCA1-219ENST00000491747 CTC1Q2NKJ3 1217 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 CRELD2Q6UXH1 353 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-219ENST00000491747 VN1R2Q8NFZ6 395 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 HASPINQ8TF76 798 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 B3GALT6Q96L58 329 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 GPR62Q9BZJ7 368 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 RASSF4Q9H2L5 321 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 SLC39A2Q9NP94 309 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 MED4Q9NPJ6 270 aa10.14□□□□□ -0.79
BRCA1-219ENST00000491747 LIMA1Q9UHB6 759 aaKnown RBP10.14□□□□□ -0.79
BRCA1-219ENST00000491747 CPSF3Q9UKF6 684 aaKnown RBP10.14□□□□□ -0.79
BRCA1-219ENST00000491747 PVALEFA0A1B0GWK0 134 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 TTC26A0AVF1 554 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 C2orf71A6NGG8 1288 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 LACTBL1A8MY62 500 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 KIF4AO95239 1232 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 CXCL14O95715 111 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 RHOXF2BP0C7M4 288 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 CTSAP10619 480 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 KCNE1P15382 129 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 MCM3P25205 808 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 ABCD1P33897 745 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 CLCNKBP51801 687 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 CASP8Q14790 479 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 FAM26FQ5R3K3 315 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 MRPL43Q8N983 215 aaKnown RBP10.13□□□□□ -0.79
BRCA1-219ENST00000491747 C3orf58Q8NDZ4 430 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 ACRBPQ8NEB7 543 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 FAM71BQ8TC56 605 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 ZNF507Q8TCN5 953 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 HLA-CQ95604 372 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 RHOXF2Q9BQY4 288 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 TOPORSQ9NS56 1045 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-219ENST00000491747 THEGQ9P2T0 379 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 MYO6Q9UM54 1294 aa10.13□□□□□ -0.79
BRCA1-219ENST00000491747 CTNND2Q9UQB3 1225 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms