RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 STAU1O95793 577 aaKnown RBP23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 RPL9P32969 192 aaKnown RBP23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 RABGGTBP53611 331 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 MYO1EQ12965 1108 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 UPP1Q16831 310 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 WDR72Q3MJ13 1102 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 EDEM3Q9BZQ6 932 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 PODXLO00592 558 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 GCNT1Q02742 428 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 LRRC43Q8N309 656 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 BAP1Q92560 729 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 KAT5Q92993 513 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 ZNF560Q96MR9 790 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 UROC1Q96N76 676 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 NIF3L1Q9GZT8 377 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 RC3H2Q9HBD1 1191 aaKnown RBP23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 LUC7L2Q9Y383 392 aaKnown RBP23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 MFAP3LO75121 409 aa23.34■■□□□ 1.33
VCPKMT-204ENST00000491402 PNPLA4P41247 253 aa23.34■■□□□ 1.33
VCPKMT-204ENST00000491402 ADKP55263 362 aaKnown RBP23.34■■□□□ 1.33
VCPKMT-204ENST00000491402 GOLGA8FQ08AF8 430 aa23.34■■□□□ 1.33
VCPKMT-204ENST00000491402 GOLGA8DPQ0D2H9 430 aa23.34■■□□□ 1.33
VCPKMT-204ENST00000491402 RAPGEF1Q13905 1077 aa23.34■■□□□ 1.33
VCPKMT-204ENST00000491402 PAN2Q504Q3 1202 aaKnown RBP23.34■■□□□ 1.33
VCPKMT-204ENST00000491402 ZNF667Q5HYK9 610 aa23.34■■□□□ 1.33
VCPKMT-204ENST00000491402 COLGALT2Q8IYK4 626 aa23.34■■□□□ 1.33
VCPKMT-204ENST00000491402 ZNF689Q96CS4 500 aaPredicted RBP23.34■■□□□ 1.33
VCPKMT-204ENST00000491402 KREMEN1Q96MU8 473 aa23.34■■□□□ 1.33
VCPKMT-204ENST00000491402 FAM193BQ96PV7 902 aaPredicted RBP23.34■■□□□ 1.33
VCPKMT-204ENST00000491402 ARID3AQ99856 593 aa23.34■■□□□ 1.33
VCPKMT-204ENST00000491402 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.33■■□□□ 1.33
VCPKMT-204ENST00000491402 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.33■■□□□ 1.33
VCPKMT-204ENST00000491402 AKR1B15C9JRZ8 316 aaPredicted RBP23.33■■□□□ 1.33
VCPKMT-204ENST00000491402 TAF6P49848 677 aa23.33■■□□□ 1.33
VCPKMT-204ENST00000491402 CUL2Q13617 745 aa23.33■■□□□ 1.33
VCPKMT-204ENST00000491402 CNGA4Q8IV77 575 aa23.33■■□□□ 1.33
VCPKMT-204ENST00000491402 ZNF397Q8NF99 534 aaPredicted RBP23.33■■□□□ 1.33
VCPKMT-204ENST00000491402 RABGGTAQ92696 567 aa23.33■■□□□ 1.33
VCPKMT-204ENST00000491402 DDX27Q96GQ7 796 aaKnown RBP23.33■■□□□ 1.33
VCPKMT-204ENST00000491402 HCSTQ9UBK5 93 aa23.33■■□□□ 1.33
VCPKMT-204ENST00000491402 NXF1Q9UBU9 619 aaKnown RBP23.33■■□□□ 1.33
VCPKMT-204ENST00000491402 DNAJB4Q9UDY4 337 aa23.33■■□□□ 1.33
VCPKMT-204ENST00000491402 TLL1O43897 1013 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 TBXAS1P24557 533 aaPredicted RBP23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 KRT9P35527 623 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 ASPAP45381 313 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 MFAP3P55082 362 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 JAM2P57087 298 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 LILRA4P59901 499 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 ZBED6P86452 979 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 ARHGAP44Q17R89 818 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 SV2CQ496J9 727 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 CCDC186Q7Z3E2 898 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 TC2NQ8N9U0 490 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 C3orf58Q8NDZ4 430 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 FAM81BQ96LP2 452 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 SPAG5Q96R06 1193 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 STK33Q9BYT3 514 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 NRDE2Q9H7Z3 1164 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 A0A1W2PPC1 479 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 SPTLC1O15269 473 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 IGFBP6P24592 240 aaPredicted RBP23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 GSDMDP57764 484 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 DRAP1Q14919 205 aaPredicted RBP23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 ENOSF1Q7L5Y1 443 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 FAXDC2Q96IV6 333 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 YME1L1Q96TA2 773 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 RAD9AQ99638 391 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 GPR88Q9GZN0 384 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 POLIQ9UNA4 740 aa23.32■■□□□ 1.32
VCPKMT-204ENST00000491402 LRRC53A6NM62 1247 aa23.31■■□□□ 1.32
VCPKMT-204ENST00000491402 KPNA7A9QM74 516 aa23.31■■□□□ 1.32
VCPKMT-204ENST00000491402 F8VZ95 297 aa23.31■■□□□ 1.32
VCPKMT-204ENST00000491402 B3GAT3O94766 335 aa23.31■■□□□ 1.32
VCPKMT-204ENST00000491402 P4HA1P13674 534 aa23.31■■□□□ 1.32
VCPKMT-204ENST00000491402 MYOGP15173 224 aa23.31■■□□□ 1.32
VCPKMT-204ENST00000491402 TNNC1P63316 161 aa23.31■■□□□ 1.32
VCPKMT-204ENST00000491402 HTRA4P83105 476 aaPredicted RBP23.31■■□□□ 1.32
VCPKMT-204ENST00000491402 SCARA5Q6ZMJ2 495 aa23.31■■□□□ 1.32
VCPKMT-204ENST00000491402 ABHD10Q9NUJ1 306 aa23.31■■□□□ 1.32
VCPKMT-204ENST00000491402 INSL6Q9Y581 213 aa23.31■■□□□ 1.32
VCPKMT-204ENST00000491402 SNX9Q9Y5X1 595 aa23.31■■□□□ 1.32
VCPKMT-204ENST00000491402 PTMAP06454 111 aaKnown RBP23.3■■□□□ 1.32
VCPKMT-204ENST00000491402 PBX2P40425 430 aa23.3■■□□□ 1.32
VCPKMT-204ENST00000491402 ARID5BQ14865 1188 aa23.3■■□□□ 1.32
VCPKMT-204ENST00000491402 PDXDC1Q6P996 788 aa23.3■■□□□ 1.32
VCPKMT-204ENST00000491402 BCO2Q9BYV7 579 aa23.3■■□□□ 1.32
VCPKMT-204ENST00000491402 GDAP2Q9NXN4 497 aa23.3■■□□□ 1.32
VCPKMT-204ENST00000491402 MYO6Q9UM54 1294 aa23.3■■□□□ 1.32
VCPKMT-204ENST00000491402 KIF4AO95239 1232 aa23.29■■□□□ 1.32
VCPKMT-204ENST00000491402 OR1G1P47890 313 aa23.29■■□□□ 1.32
VCPKMT-204ENST00000491402 CMTR2Q8IYT2 770 aaKnown RBP23.29■■□□□ 1.32
VCPKMT-204ENST00000491402 SHC3Q92529 594 aa23.29■■□□□ 1.32
VCPKMT-204ENST00000491402 JAKMIP2Q96AA8 810 aa23.29■■□□□ 1.32
VCPKMT-204ENST00000491402 DNAJC7Q99615 494 aa23.29■■□□□ 1.32
VCPKMT-204ENST00000491402 LCHNA4D1U4 455 aa23.29■■□□□ 1.32
VCPKMT-204ENST00000491402 PNMA6AP0CW24 399 aaPredicted RBP23.29■■□□□ 1.32
VCPKMT-204ENST00000491402 DCLRE1AQ6PJP8 1040 aa23.29■■□□□ 1.32
VCPKMT-204ENST00000491402 OR8K1Q8NGG5 319 aa23.29■■□□□ 1.32
VCPKMT-204ENST00000491402 MMS19Q96T76 1030 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms