RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 OR4Q2P0C623 313 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 CYP3A5P20815 502 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 FCARP24071 287 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 PFKPQ01813 784 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 KYAT1Q16773 422 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 TANGO2Q6ICL3 276 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 USP49Q70CQ1 688 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 PDZD4Q76G19 769 aaPredicted RBP17.08■□□□□ 0.32
SMPD4-220ENST00000491319 MAP4K3Q8IVH8 894 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 HS6ST3Q8IZP7 471 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 ELMOD1Q8N336 334 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 FAM212AQ96EL1 285 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 CEP72Q9P209 647 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 CLIC4Q9Y696 253 aa17.08■□□□□ 0.32
SMPD4-220ENST00000491319 TISP43B9A030 160 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 ANKRD63C9JTQ0 380 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 XPOTO43592 962 aaKnown RBP17.07■□□□□ 0.32
SMPD4-220ENST00000491319 OAZ2O95190 189 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 ADRB2P07550 413 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 NFICP08651 508 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 CD72P21854 359 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 SCP2P22307 547 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 GTF2BQ00403 316 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 PRKCQQ04759 706 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 CUL4AQ13619 759 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 UBXN2BQ14CS0 331 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 ZC2HC1CQ53FD0 456 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-220ENST00000491319 JADE1Q6IE81 842 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 C1orf210Q8IVY1 113 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 BEST2Q8NFU1 509 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 ELSPBP1Q96BH3 223 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 EPSTI1Q96J88 318 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 PGLYRP2Q96PD5 576 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 CCSER1Q9C0I3 900 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 CPSF3Q9UKF6 684 aaKnown RBP17.07■□□□□ 0.32
SMPD4-220ENST00000491319 MTF2Q9Y483 593 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-220ENST00000491319 YIPF1Q9Y548 306 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-220ENST00000491319 R4GN57 208 aa17.07■□□□□ 0.32
SMPD4-220ENST00000491319 EP300Q09472 2414 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-220ENST00000491319 ZNF197O14709 1029 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 MOSPD3O75425 235 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 GJA1P17302 382 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 GRM2Q14416 872 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 PTPAQ15257 358 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 FAM78AQ5JUQ0 283 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 SPATA1Q5VX52 437 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 IQCEQ6IPM2 695 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 DSTYKQ6XUX3 929 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 TPRG1Q6ZUI0 275 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 USP37Q86T82 979 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 SFR1Q86XK3 245 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 ADSSL1Q8N142 457 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 ASB16Q96NS5 453 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 IKZF4Q9H2S9 585 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 CRISPLD1Q9H336 500 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 LTB4R2Q9NPC1 389 aa17.06■□□□□ 0.32
SMPD4-220ENST00000491319 SP9P0CG40 484 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 MYL4P12829 197 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 ACOT2P49753 483 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 EPHA5P54756 1037 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 TMEM132DQ14C87 1099 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 CYP4A22Q5TCH4 519 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 OVOS1Q6IE37 1185 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 FAM173BQ6P4H8 233 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 DYMQ7RTS9 669 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 ZNF512Q96ME7 567 aaPredicted RBP17.05■□□□□ 0.32
SMPD4-220ENST00000491319 ZSWIM3Q96MP5 696 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 ZFP14Q9HCL3 533 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 ASAH2Q9NR71 780 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 HEBP1Q9NRV9 189 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 FBXO2Q9UK22 296 aaPredicted RBP17.05■□□□□ 0.32
SMPD4-220ENST00000491319 MAFFQ9ULX9 164 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 OTOGLQ3ZCN5 2332 aa17.05■□□□□ 0.32
SMPD4-220ENST00000491319 NCANO14594 1321 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 OR6C75A6NL08 312 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 FAM170BA6NMN3 283 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 SPTLC1O15269 473 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 MICAL2O94851 1124 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 TYMPP19971 482 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 TARSP26639 723 aaKnown RBP17.04■□□□□ 0.32
SMPD4-220ENST00000491319 DDIT3P35638 169 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 LILRA4P59901 499 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 RESTQ13127 1097 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 C9orf57Q5W0N0 161 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 CD302Q8IX05 232 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 MAML2Q8IZL2 1156 aaPredicted RBP17.04■□□□□ 0.32
SMPD4-220ENST00000491319 TTC9BQ8N6N2 239 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
SMPD4-220ENST00000491319 SENP8Q96LD8 212 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 CLIC6Q96NY7 704 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 TSPAN18Q96SJ8 248 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 TMEM209Q96SK2 561 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 OXCT2Q9BYC2 517 aaPredicted RBP17.04■□□□□ 0.32
SMPD4-220ENST00000491319 BCO2Q9BYV7 579 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 DNAJC25Q9H1X3 360 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 STK17AQ9UEE5 414 aa17.04■□□□□ 0.32
SMPD4-220ENST00000491319 MTMR11A4FU01 709 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 SHISA7A6NL88 538 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 ODC1P11926 461 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms