RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 OR14C36Q8NHC7 312 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 ZFP28Q8NHY6 868 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 PIBF1Q8WXW3 757 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 SLC5A5Q92911 643 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 MAP4K1Q92918 833 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 EAF2Q96CJ1 260 aaPredicted RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 EVI5LQ96CN4 794 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 TTC1Q99614 292 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 MEIS3Q99687 375 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 THUMPD2Q9BTF0 503 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 CCDC94Q9BW85 323 aaPredicted RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 TARS2Q9BW92 718 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 WDR11Q9BZH6 1224 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 KCNH6Q9H252 994 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 MS4A5Q9H3V2 200 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 ZSCAN16Q9H4T2 348 aaPredicted RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 PIF1Q9H611 641 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 AKIP1Q9NQ31 210 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 GPRC5BQ9NZH0 403 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 PTGFRNQ9P2B2 879 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 PRSS50Q9UI38 385 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 TSPYL4Q9UJ04 414 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 PACSIN3Q9UKS6 424 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 CFAP45Q9UL16 551 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 SMC3Q9UQE7 1217 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 MAP3K2Q9Y2U5 619 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 MTO1Q9Y2Z2 717 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 TBX22Q9Y458 520 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 KIF3AQ9Y496 699 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 CYP46A1Q9Y6A2 500 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 MRPL42Q9Y6G3 142 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 NUMBLQ9Y6R0 609 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 IQSEC2Q5JU85 1478 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 TTC41PQ6P2S7 1318 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 TTC21AQ8NDW8 1320 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 SALL3Q9BXA9 1300 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 ABCC3O15438 1527 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 EFCAB6Q5THR3 1501 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 INO80Q9ULG1 1556 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 EDC4Q6P2E9 1401 aaKnown RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 SSH2Q76I76 1423 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 MYO5BQ9ULV0 1848 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 UQCRHLA0A096LP55 91 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 A0A0A6YYK5 440 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 KLRG2A4D1S0 409 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 TBKBP1A7MCY6 615 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 LEFTY2O00292 366 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 KIAA0355O15063 1070 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 PDE8AO60658 829 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 LPXNO60711 386 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 MAFO75444 373 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 KIF20AO95235 890 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 UQCRHP07919 91 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 HOXB7P09629 217 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 LTA4HP09960 611 aaKnown RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 UBTFL1P0CB47 393 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 CPEP16870 476 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 LSSP48449 732 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 GPR15P49685 360 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 RABGGTBP53611 331 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 TUBB4BP68371 445 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 MRPS21P82921 87 aaKnown RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 CREMQ03060 361 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 RESTQ13127 1097 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 G3BP1Q13283 466 aaKnown RBP eCLIP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 MTX1Q13505 466 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 PKP1Q13835 747 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 KRT32Q14532 448 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 RRS1Q15050 365 aaKnown RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 NOMO1Q15155 1222 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 CLUL1Q15846 466 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 TKFCQ3LXA3 575 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 PLEKHO1Q53GL0 409 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 PLEKHG4Q58EX7 1191 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ATXN7L2Q5T6C5 722 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 HECTD2Q5U5R9 776 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 SP5Q6BEB4 398 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ABHD15Q6UXT9 468 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 KSR2Q6VAB6 950 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 MED25Q71SY5 747 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 MCM10Q7L590 875 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 PPP1R42Q7Z4L9 355 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 MRGPREQ86SM8 312 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 RASSF3Q86WH2 238 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 CXorf67Q86X51 503 aaPredicted RBP2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 LDLRAD3Q86YD5 345 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 UNC5BQ8IZJ1 945 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 AMER2Q8N7J2 671 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 SMC1BQ8NDV3 1235 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 OR10H5Q8NGA6 315 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 KIAA1524Q8TCG1 905 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 TGFBRAP1Q8WUH2 860 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 RSAD2Q8WXG1 361 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 RNF31Q96EP0 1072 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 MFSD3Q96ES6 412 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 GPATCH3Q96I76 525 aa2.36□□□□□ -2.03
SNRNP40-207ENST00000491106 TTC14Q96N46 770 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms