RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 C17orf75Q9HAS0 396 aa22.56■■□□□ 1.2
CLIP2-208ENST00000491075 YIPF1Q9Y548 306 aa22.56■■□□□ 1.2
CLIP2-208ENST00000491075 HIP1RO75146 1068 aa22.55■■□□□ 1.2
CLIP2-208ENST00000491075 PAPSS2O95340 614 aaPredicted RBP22.55■■□□□ 1.2
CLIP2-208ENST00000491075 CNR2P34972 360 aa22.55■■□□□ 1.2
CLIP2-208ENST00000491075 PTGDRQ13258 359 aa22.55■■□□□ 1.2
CLIP2-208ENST00000491075 PLD1Q13393 1074 aa22.55■■□□□ 1.2
CLIP2-208ENST00000491075 GAS6Q14393 721 aa22.55■■□□□ 1.2
CLIP2-208ENST00000491075 BEST2Q8NFU1 509 aa22.55■■□□□ 1.2
CLIP2-208ENST00000491075 SHKBP1Q8TBC3 707 aa22.55■■□□□ 1.2
CLIP2-208ENST00000491075 SNX29Q8TEQ0 813 aa22.55■■□□□ 1.2
CLIP2-208ENST00000491075 C8orf76Q96K31 380 aa22.55■■□□□ 1.2
CLIP2-208ENST00000491075 OXCT2Q9BYC2 517 aaPredicted RBP22.55■■□□□ 1.2
CLIP2-208ENST00000491075 RAB34Q9BZG1 259 aa22.55■■□□□ 1.2
CLIP2-208ENST00000491075 C8orf33Q9H7E9 229 aaPredicted RBP22.55■■□□□ 1.2
CLIP2-208ENST00000491075 SEMA4GQ9NTN9 838 aa22.55■■□□□ 1.2
CLIP2-208ENST00000491075 MAP1BP46821 2468 aaKnown RBP22.54■■□□□ 1.2
CLIP2-208ENST00000491075 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.54■■□□□ 1.2
CLIP2-208ENST00000491075 CHADO15335 359 aa22.54■■□□□ 1.2
CLIP2-208ENST00000491075 FOXD2O60548 495 aaPredicted RBP22.54■■□□□ 1.2
CLIP2-208ENST00000491075 HARSP12081 509 aaKnown RBP22.54■■□□□ 1.2
CLIP2-208ENST00000491075 MARCKSP29966 332 aaPredicted RBP22.54■■□□□ 1.2
CLIP2-208ENST00000491075 TRAPPC10P48553 1259 aa22.54■■□□□ 1.2
CLIP2-208ENST00000491075 YWHAHQ04917 246 aaPredicted RBP22.54■■□□□ 1.2
CLIP2-208ENST00000491075 PDIA5Q14554 519 aa22.54■■□□□ 1.2
CLIP2-208ENST00000491075 CSRP2Q16527 193 aa22.54■■□□□ 1.2
CLIP2-208ENST00000491075 PPM1JQ5JR12 505 aa22.54■■□□□ 1.2
CLIP2-208ENST00000491075 PRR23CQ6ZRP0 262 aa22.54■■□□□ 1.2
CLIP2-208ENST00000491075 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.54■■□□□ 1.2
CLIP2-208ENST00000491075 DNM3Q9UQ16 869 aa22.54■■□□□ 1.2
CLIP2-208ENST00000491075 MEFVO15553 781 aaPredicted RBP22.53■■□□□ 1.2
CLIP2-208ENST00000491075 NEK4P51957 841 aa22.53■■□□□ 1.2
CLIP2-208ENST00000491075 FCHO2Q0JRZ9 810 aa22.53■■□□□ 1.2
CLIP2-208ENST00000491075 ST3GAL1Q11201 340 aa22.53■■□□□ 1.2
CLIP2-208ENST00000491075 NOLC1Q14978 699 aaKnown RBP eCLIP22.53■■□□□ 1.2
CLIP2-208ENST00000491075 LONP2Q86WA8 852 aa22.53■■□□□ 1.2
CLIP2-208ENST00000491075 C4orf32Q8N8J7 132 aa22.53■■□□□ 1.2
CLIP2-208ENST00000491075 IGSF22Q8N9C0 903 aa22.53■■□□□ 1.2
CLIP2-208ENST00000491075 ANKFY1Q9P2R3 1169 aa22.53■■□□□ 1.2
CLIP2-208ENST00000491075 TUBGCP4Q9UGJ1 667 aa22.53■■□□□ 1.2
CLIP2-208ENST00000491075 NOL7Q9UMY1 257 aaKnown RBP22.53■■□□□ 1.2
CLIP2-208ENST00000491075 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.53■■□□□ 1.2
CLIP2-208ENST00000491075 CHD8Q9HCK8 2581 aa22.53■■□□□ 1.2
CLIP2-208ENST00000491075 SLC38A8A6NNN8 435 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 CHURC1-FNTBB4DL54 471 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 M0QZQ0 153 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 TOM1L1O75674 476 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 OAZ2O95190 189 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 FNTBP49356 437 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 KPNA1P52294 538 aaPredicted RBP22.52■■□□□ 1.2
CLIP2-208ENST00000491075 STRN3Q13033 797 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 MAPK7Q13164 816 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 GNL2Q13823 731 aaKnown RBP22.52■■□□□ 1.2
CLIP2-208ENST00000491075 SLC10A6Q3KNW5 377 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 DGKKQ5KSL6 1271 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 TMC8Q8IU68 726 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 RSPRY1Q96DX4 576 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 RUSC1Q9BVN2 902 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 TIPINQ9BVW5 301 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 LRRC3Q9BY71 257 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 GREB1Q4ZG55 1949 aa22.52■■□□□ 1.2
CLIP2-208ENST00000491075 A0A1W2PRU2 124 aa22.51■■□□□ 1.19
CLIP2-208ENST00000491075 E9PMD0 336 aa22.51■■□□□ 1.19
CLIP2-208ENST00000491075 SLC16A4O15374 487 aa22.51■■□□□ 1.19
CLIP2-208ENST00000491075 HRO43593 1189 aa22.51■■□□□ 1.19
CLIP2-208ENST00000491075 EPHB3P54753 998 aa22.51■■□□□ 1.19
CLIP2-208ENST00000491075 DMWDQ09019 674 aa22.51■■□□□ 1.19
CLIP2-208ENST00000491075 RALGPS2Q86X27 583 aaPredicted RBP22.51■■□□□ 1.19
CLIP2-208ENST00000491075 ZBTB45Q96K62 511 aaPredicted RBP22.51■■□□□ 1.19
CLIP2-208ENST00000491075 RBM12Q9NTZ6 932 aaKnown RBP22.51■■□□□ 1.19
CLIP2-208ENST00000491075 KIF26AQ9ULI4 1882 aaPredicted RBP22.51■■□□□ 1.19
CLIP2-208ENST00000491075 MYBPHLA2RUH7 354 aa22.5■■□□□ 1.19
CLIP2-208ENST00000491075 K7ESF4 209 aa22.5■■□□□ 1.19
CLIP2-208ENST00000491075 VNN2O95498 520 aa22.5■■□□□ 1.19
CLIP2-208ENST00000491075 CTHP32929 405 aa22.5■■□□□ 1.19
CLIP2-208ENST00000491075 ST3GAL2Q16842 350 aa22.5■■□□□ 1.19
CLIP2-208ENST00000491075 KRT79Q5XKE5 535 aa22.5■■□□□ 1.19
CLIP2-208ENST00000491075 RINT1Q6NUQ1 792 aa22.5■■□□□ 1.19
CLIP2-208ENST00000491075 FAM200AQ8TCP9 573 aa22.5■■□□□ 1.19
CLIP2-208ENST00000491075 PGLYRP2Q96PD5 576 aa22.5■■□□□ 1.19
CLIP2-208ENST00000491075 NTPCRQ9BSD7 190 aaKnown RBP22.5■■□□□ 1.19
CLIP2-208ENST00000491075 DNAJC25Q9H1X3 360 aa22.5■■□□□ 1.19
CLIP2-208ENST00000491075 PLEKHA5Q9HAU0 1116 aa22.5■■□□□ 1.19
CLIP2-208ENST00000491075 KCNG1Q9UIX4 513 aa22.5■■□□□ 1.19
CLIP2-208ENST00000491075 OR6C75A6NL08 312 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 SPECC1L-ADORA2AF8WAN1 911 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 CXCL8P10145 99 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 LRPAP1P30533 357 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 ALDH1A3P47895 512 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 SOX9P48436 509 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 SRSF5Q13243 272 aaKnown RBP22.49■■□□□ 1.19
CLIP2-208ENST00000491075 GPR17Q13304 367 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 ARHGAP29Q52LW3 1261 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 SEZ6Q53EL9 994 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 ZPBP2Q6X784 338 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 Q6ZS52 159 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 C1orf186Q6ZWK4 172 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 USP37Q86T82 979 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 ARID3BQ8IVW6 561 aaPredicted RBP22.49■■□□□ 1.19
CLIP2-208ENST00000491075 FBXO18Q8NFZ0 1043 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms