RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 LMBRD2Q68DH5 695 aaPredicted RBP17.05■□□□□ 0.32
TRA2A-208ENST00000490942 IRF2BP1Q8IU81 584 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 MRPL43Q8N983 215 aaKnown RBP17.05■□□□□ 0.32
TRA2A-208ENST00000490942 PIK3R5Q8WYR1 880 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 CNOT6LQ96LI5 555 aaKnown RBP17.05■□□□□ 0.32
TRA2A-208ENST00000490942 GUCD1Q96NT3 240 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 RXFP1Q9HBX9 757 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 MRPL17Q9NRX2 175 aaKnown RBP17.05■□□□□ 0.32
TRA2A-208ENST00000490942 MAGEC2Q9UBF1 373 aaPredicted RBP17.05■□□□□ 0.32
TRA2A-208ENST00000490942 COQ4Q9Y3A0 265 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 NFE2L3Q9Y4A8 694 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 MTCH2Q9Y6C9 303 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 CHD9Q3L8U1 2897 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 MYO9BQ13459 2157 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 SMTNL1A8MU46 457 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 RFXAPO00287 272 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 PPEF2O14830 753 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 PHACTR2O75167 634 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 CYP11A1P05108 521 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 KRT19P08727 400 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 TRIM49P0CI25 452 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 TRIM49CP0CI26 452 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 ZNF165P49910 485 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 ERVFC1P60507 584 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 CETN1Q12798 172 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 NCOA4Q13772 614 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 ADGRE1Q14246 886 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 PTPN14Q15678 1187 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 SGSM1Q2NKQ1 1148 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 CDKAL1Q5VV42 579 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 KIAA1841Q6NSI8 718 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 ANKS3Q6ZW76 656 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 Q7L0L9 218 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 TMC7Q7Z402 723 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 RABGGTAQ92696 567 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 HPDLQ96IR7 371 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 CDCA3Q99618 268 aaPredicted RBP17.04■□□□□ 0.32
TRA2A-208ENST00000490942 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
TRA2A-208ENST00000490942 NSUN3Q9H649 340 aaKnown RBP17.04■□□□□ 0.32
TRA2A-208ENST00000490942 ENTPD7Q9NQZ7 604 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 FNIP2Q9P278 1114 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRA2A-208ENST00000490942 BACE2Q9Y5Z0 518 aa17.04■□□□□ 0.32
TRA2A-208ENST00000490942 COL4A4P53420 1690 aaPredicted RBP17.04■□□□□ 0.32
TRA2A-208ENST00000490942 SPTLC1O15269 473 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 NCK2O43639 380 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 OAZ2O95190 189 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 CST3P01034 146 aaPredicted RBP17.03■□□□□ 0.32
TRA2A-208ENST00000490942 ODC1P11926 461 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 BRCC3P46736 316 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 GCLMP48507 274 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 MRPL58Q14197 206 aaKnown RBP17.03■□□□□ 0.32
TRA2A-208ENST00000490942 DCAF17Q5H9S7 520 aaPredicted RBP17.03■□□□□ 0.32
TRA2A-208ENST00000490942 TCERG1LQ5VWI1 586 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 SMYD5Q6GMV2 418 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 DSTYKQ6XUX3 929 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 LIMS2Q7Z4I7 341 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 TMEM86AQ8N2M4 240 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 TOP6BLQ8N6T0 577 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 CCDC150Q8NCX0 1101 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 FBXL13Q8NEE6 735 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 MICAL1Q8TDZ2 1067 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 HASPINQ8TF76 798 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 SENP8Q96LD8 212 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 FAM161BQ96MY7 647 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 EMILIN2Q9BXX0 1053 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 IMPG2Q9BZV3 1241 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 XYLT2Q9H1B5 865 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 PLXNA4Q9HCM2 1894 aa17.03■□□□□ 0.32
TRA2A-208ENST00000490942 LAMA2P24043 3122 aaKnown RBP17.02■□□□□ 0.32
TRA2A-208ENST00000490942 C2orf71A6NGG8 1288 aa17.02■□□□□ 0.32
TRA2A-208ENST00000490942 H7C4K7 107 aa17.02■□□□□ 0.32
TRA2A-208ENST00000490942 VNN1O95497 513 aa17.02■□□□□ 0.32
TRA2A-208ENST00000490942 CXCL14O95715 111 aa17.02■□□□□ 0.32
TRA2A-208ENST00000490942 ASS1P00966 412 aaKnown RBP17.02■□□□□ 0.32
TRA2A-208ENST00000490942 AFPP02771 609 aaKnown RBP17.02■□□□□ 0.32
TRA2A-208ENST00000490942 IGFBP6P24592 240 aaPredicted RBP17.02■□□□□ 0.32
TRA2A-208ENST00000490942 FMO5P49326 533 aa17.02■□□□□ 0.32
TRA2A-208ENST00000490942 NCAPHQ15003 741 aa17.02■□□□□ 0.32
TRA2A-208ENST00000490942 MAN2A1Q16706 1144 aa17.02■□□□□ 0.32
TRA2A-208ENST00000490942 RTP2Q5QGT7 225 aa17.02■□□□□ 0.32
TRA2A-208ENST00000490942 PPFIBP1Q86W92 1011 aa17.02■□□□□ 0.32
TRA2A-208ENST00000490942 LNX1Q8TBB1 728 aaPredicted RBP17.02■□□□□ 0.32
TRA2A-208ENST00000490942 GTPBP10A4D1E9 387 aaKnown RBP17.01■□□□□ 0.31
TRA2A-208ENST00000490942 TULP1O00294 542 aaPredicted RBP17.01■□□□□ 0.31
TRA2A-208ENST00000490942 CYB561D2O14569 222 aa17.01■□□□□ 0.31
TRA2A-208ENST00000490942 HUS1O60921 280 aa17.01■□□□□ 0.31
TRA2A-208ENST00000490942 HLA-DRAP01903 254 aa17.01■□□□□ 0.31
TRA2A-208ENST00000490942 P4HA1P13674 534 aa17.01■□□□□ 0.31
TRA2A-208ENST00000490942 FOSL2P15408 326 aa17.01■□□□□ 0.31
TRA2A-208ENST00000490942 ZNF18P17022 549 aa17.01■□□□□ 0.31
TRA2A-208ENST00000490942 IRS1P35568 1242 aa17.01■□□□□ 0.31
TRA2A-208ENST00000490942 ZNF445P59923 1031 aa17.01■□□□□ 0.31
TRA2A-208ENST00000490942 MYL6P60660 151 aa17.01■□□□□ 0.31
TRA2A-208ENST00000490942 YWHAHQ04917 246 aaPredicted RBP17.01■□□□□ 0.31
TRA2A-208ENST00000490942 KCNH2Q12809 1159 aa17.01■□□□□ 0.31
TRA2A-208ENST00000490942 ZNF699Q32M78 642 aa17.01■□□□□ 0.31
TRA2A-208ENST00000490942 TCP11X2Q5H9J9 407 aa17.01■□□□□ 0.31
TRA2A-208ENST00000490942 VARS2Q5ST30 1063 aaKnown RBP17.01■□□□□ 0.31
TRA2A-208ENST00000490942 ZNF280DQ6N043 979 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms