RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 AVPR2P30518 371 aa33.99■■■■□ 3.03
LDB1-204ENST00000490751 LILRA4P59901 499 aa33.99■■■■□ 3.03
LDB1-204ENST00000490751 PABPC1LQ4VXU2 614 aaKnown RBP33.99■■■■□ 3.03
LDB1-204ENST00000490751 ATL3Q6DD88 541 aa33.99■■■■□ 3.03
LDB1-204ENST00000490751 USP37Q86T82 979 aa33.99■■■■□ 3.03
LDB1-204ENST00000490751 ITFG1Q8TB96 612 aa33.99■■■■□ 3.03
LDB1-204ENST00000490751 TRIM9Q9C026 710 aa33.99■■■■□ 3.03
LDB1-204ENST00000490751 TSC2P49815 1807 aa33.99■■■■□ 3.03
LDB1-204ENST00000490751 PRPF6O94906 941 aaKnown RBP33.98■■■■□ 3.03
LDB1-204ENST00000490751 ME1P48163 572 aa33.98■■■■□ 3.03
LDB1-204ENST00000490751 HTR4Q13639 388 aa33.98■■■■□ 3.03
LDB1-204ENST00000490751 SLC44A3Q8N4M1 653 aa33.98■■■■□ 3.03
LDB1-204ENST00000490751 ST13P5Q8NFI4 369 aaPredicted RBP33.98■■■■□ 3.03
LDB1-204ENST00000490751 FGF13Q92913 245 aa33.98■■■■□ 3.03
LDB1-204ENST00000490751 SAAL1Q96ER3 474 aa33.98■■■■□ 3.03
LDB1-204ENST00000490751 FAM213AQ9BRX8 229 aa33.98■■■■□ 3.03
LDB1-204ENST00000490751 AFF4Q9UHB7 1163 aaKnown RBP33.98■■■■□ 3.03
LDB1-204ENST00000490751 PCDHA7Q9UN72 937 aa33.98■■■■□ 3.03
LDB1-204ENST00000490751 INSL5Q9Y5Q6 135 aa33.98■■■■□ 3.03
LDB1-204ENST00000490751 SCN1AP35498 2009 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 ANO9A1A5B4 782 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 ANHXE9PGG2 379 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 PIRO00625 290 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 SPTLC1O15269 473 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 IL18RAPO95256 599 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 AMPD3Q01432 767 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 DNM1Q05193 864 aaKnown RBP33.97■■■■□ 3.03
LDB1-204ENST00000490751 ADCY1Q08828 1119 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 EFCAB13Q8IY85 973 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 ZSWIM2Q8NEG5 633 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 HPS3Q969F9 1004 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 SENP8Q96LD8 212 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 TMEM206Q9H813 350 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 CFAP45Q9UL16 551 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 NUMBLQ9Y6R0 609 aa33.97■■■■□ 3.03
LDB1-204ENST00000490751 TYMPP19971 482 aa33.96■■■■□ 3.03
LDB1-204ENST00000490751 GARTP22102 1010 aa33.96■■■■□ 3.03
LDB1-204ENST00000490751 PAX3P23760 479 aa33.96■■■■□ 3.03
LDB1-204ENST00000490751 ASIC1P78348 528 aa33.96■■■■□ 3.03
LDB1-204ENST00000490751 PRSS33Q8NF86 280 aa33.96■■■■□ 3.03
LDB1-204ENST00000490751 OXCT2Q9BYC2 517 aaPredicted RBP33.96■■■■□ 3.03
LDB1-204ENST00000490751 MFSD1Q9H3U5 465 aa33.96■■■■□ 3.03
LDB1-204ENST00000490751 DPP3Q9NY33 737 aa33.96■■■■□ 3.03
LDB1-204ENST00000490751 FBXL21Q9UKT6 434 aa33.96■■■■□ 3.03
LDB1-204ENST00000490751 KCNH3Q9ULD8 1083 aa33.96■■■■□ 3.03
LDB1-204ENST00000490751 WDFY4Q6ZS81 3184 aa33.95■■■■□ 3.03
LDB1-204ENST00000490751 POLR2DO15514 142 aaKnown RBP33.95■■■■□ 3.03
LDB1-204ENST00000490751 RHOP08100 348 aa33.95■■■■□ 3.03
LDB1-204ENST00000490751 ODC1P11926 461 aa33.95■■■■□ 3.03
LDB1-204ENST00000490751 OVOS1Q6IE37 1185 aa33.95■■■■□ 3.03
LDB1-204ENST00000490751 RNF19BQ6ZMZ0 732 aa33.95■■■■□ 3.03
LDB1-204ENST00000490751 BRSK2Q8IWQ3 736 aa33.95■■■■□ 3.03
LDB1-204ENST00000490751 GLIS3Q8NEA6 775 aa33.95■■■■□ 3.03
LDB1-204ENST00000490751 CBWD1Q9BRT8 395 aa33.95■■■■□ 3.03
LDB1-204ENST00000490751 FAM13BQ9NYF5 915 aa33.95■■■■□ 3.03
LDB1-204ENST00000490751 TCHHQ07283 1943 aa33.94■■■■□ 3.02
LDB1-204ENST00000490751 LDHAP00338 332 aaKnown RBP33.94■■■■□ 3.02
LDB1-204ENST00000490751 OR4Q2P0C623 313 aa33.94■■■■□ 3.02
LDB1-204ENST00000490751 PTPN2P17706 415 aa33.94■■■■□ 3.02
LDB1-204ENST00000490751 STXBP4Q6ZWJ1 553 aa33.94■■■■□ 3.02
LDB1-204ENST00000490751 ING5Q8WYH8 240 aa33.94■■■■□ 3.02
LDB1-204ENST00000490751 PRRX2Q99811 253 aa33.94■■■■□ 3.02
LDB1-204ENST00000490751 MAGEF1Q9HAY2 307 aa33.94■■■■□ 3.02
LDB1-204ENST00000490751 MAFFQ9ULX9 164 aa33.94■■■■□ 3.02
LDB1-204ENST00000490751 MRPS23Q9Y3D9 190 aaKnown RBP33.94■■■■□ 3.02
LDB1-204ENST00000490751 GOLGA8IPA6NC78 632 aa33.93■■■■□ 3.02
LDB1-204ENST00000490751 OR6C75A6NL08 312 aa33.93■■■■□ 3.02
LDB1-204ENST00000490751 GOLGA8JA6NMD2 632 aa33.93■■■■□ 3.02
LDB1-204ENST00000490751 TULP1O00294 542 aaPredicted RBP33.93■■■■□ 3.02
LDB1-204ENST00000490751 CFHP08603 1231 aa33.93■■■■□ 3.02
LDB1-204ENST00000490751 SRFP11831 508 aa33.93■■■■□ 3.02
LDB1-204ENST00000490751 WNT7BP56706 349 aa33.93■■■■□ 3.02
LDB1-204ENST00000490751 RESP18Q5W5W9 173 aa33.93■■■■□ 3.02
LDB1-204ENST00000490751 CNNM4Q6P4Q7 775 aa33.93■■■■□ 3.02
LDB1-204ENST00000490751 PARM1Q6UWI2 310 aa33.93■■■■□ 3.02
LDB1-204ENST00000490751 NT5DC4Q86YG4 428 aa33.93■■■■□ 3.02
LDB1-204ENST00000490751 NPAS3Q8IXF0 933 aa33.93■■■■□ 3.02
LDB1-204ENST00000490751 FGF14Q92915 247 aa33.93■■■■□ 3.02
LDB1-204ENST00000490751 PCIF1Q9H4Z3 704 aa33.93■■■■□ 3.02
LDB1-204ENST00000490751 RBAKQ9NYW8 714 aaPredicted RBP33.93■■■■□ 3.02
LDB1-204ENST00000490751 NHLH1Q02575 133 aa33.92■■■■□ 3.02
LDB1-204ENST00000490751 SLC5A9Q2M3M2 681 aa33.92■■■■□ 3.02
LDB1-204ENST00000490751 ARMCX5Q6P1M9 558 aa33.92■■■■□ 3.02
LDB1-204ENST00000490751 NOC3LQ8WTT2 800 aaKnown RBP33.92■■■■□ 3.02
LDB1-204ENST00000490751 PGLYRP2Q96PD5 576 aa33.92■■■■□ 3.02
LDB1-204ENST00000490751 C7orf25Q9BPX7 421 aa33.92■■■■□ 3.02
LDB1-204ENST00000490751 CORO1BQ9BR76 489 aa33.92■■■■□ 3.02
LDB1-204ENST00000490751 AVENQ9NQS1 362 aaPredicted RBP33.92■■■■□ 3.02
LDB1-204ENST00000490751 RCOR1Q9UKL0 485 aa33.92■■■■□ 3.02
LDB1-204ENST00000490751 EXTL3O43909 919 aa33.91■■■■□ 3.02
LDB1-204ENST00000490751 TAF6P49848 677 aa33.91■■■■□ 3.02
LDB1-204ENST00000490751 TWF1Q12792 350 aa33.91■■■■□ 3.02
LDB1-204ENST00000490751 MTSS1LQ765P7 747 aa33.91■■■■□ 3.02
LDB1-204ENST00000490751 SIX5Q8N196 739 aa33.91■■■■□ 3.02
LDB1-204ENST00000490751 RPP25Q9BUL9 199 aaKnown RBP33.91■■■■□ 3.02
LDB1-204ENST00000490751 TFAMQ00059 246 aaKnown RBP33.9■■■■□ 3.02
LDB1-204ENST00000490751 GPR17Q13304 367 aa33.9■■■■□ 3.02
LDB1-204ENST00000490751 ASTLQ6HA08 431 aaPredicted RBP33.9■■■■□ 3.02
LDB1-204ENST00000490751 TMEM105Q8N8V8 129 aa33.9■■■■□ 3.02
LDB1-204ENST00000490751 FLCNQ8NFG4 579 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms