RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-210	ENST00000490668	DDX49	Q9Y6V7	483 aa	Known RBP	4.85	□□□□□ -1.63
SFPQ-210	ENST00000490668	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	DCDC2B	A2VCK2	349 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	KLHL33	A6NCF5	533 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	LRRC10B	A6NIK2	292 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	FIGNL2	A6NMB9	653 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	DCDC2C	A8MYV0	355 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	SOX1	O00570	391 aa	Predicted RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	ATXN7	O15265	892 aa	Predicted RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	ADCY6	O43306	1168 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	TGM5	O43548	720 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	ZNF862	O60290	1169 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	GAS7	O60861	476 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	DTNB	O60941	627 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	ADAMTS4	O75173	837 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	OFD1	O75665	1012 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	GGPS1	O95749	300 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	PGK1	P00558	417 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	TFRC	P02786	760 aa	Known RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	CKM	P06732	381 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	TGFB3	P10600	412 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	SMPD1	P17405	629 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	ITGB5	P18084	799 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	CAPN3	P20807	821 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	CST5	P28325	142 aa	Predicted RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	ICAM3	P32942	547 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	ANP32A	P39687	249 aa	Known RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	GPR3	P46089	330 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	MRPS9	P82933	396 aa	Known RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	GUCY1B3	Q02153	619 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	NEDD9	Q14511	834 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	PDCD2	Q16342	344 aa	Predicted RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	FSCN1	Q16658	493 aa	Known RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	INF2	Q27J81	1249 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	LETM2	Q2VYF4	491 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	CEP55	Q53EZ4	464 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	INTS11	Q5TA45	600 aa	Known RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	GTF2IRD2B	Q6EKJ0	949 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	TAPT1	Q6NXT6	567 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	FAM180B	Q6P0A1	224 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	KCNT2	Q6UVM3	1135 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	MOXD1	Q6UVY6	613 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	METTL7B	Q6UX53	244 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	PIK3AP1	Q6ZUJ8	805 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	NIPA1	Q7RTP0	329 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	GTF2IRD2	Q86UP8	949 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	PLA2G4D	Q86XP0	818 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	PTRH1	Q86Y79	214 aa	Known RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	ARHGEF39	Q8N4T4	335 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	NAXE	Q8NCW5	288 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	TBCK	Q8TEA7	893 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	DIS3L	Q8TF46	1054 aa	Known RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	SLC5A5	Q92911	643 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	RCC1L	Q96I51	464 aa	Known RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	GLT1D1	Q96MS3	346 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	SPATA33	Q96N06	139 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	MXRA8	Q9BRK3	442 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	SDF4	Q9BRK5	362 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	HTATIP2	Q9BUP3	242 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	KATNAL1	Q9BW62	490 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	GTPBP4	Q9BZE4	634 aa	Known RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	NRSN2	Q9GZP1	204 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	UPF3A	Q9H1J1	476 aa	Known RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	BHMT2	Q9H2M3	363 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	FOXP1	Q9H334	677 aa	Predicted RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	C11orf49	Q9H6J7	331 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	MLXIP	Q9HAP2	919 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	ALG13	Q9NP73	1137 aa	Known RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	PDGFC	Q9NRA1	345 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	GJB4	Q9NTQ9	266 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	RRN3	Q9NYV6	651 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	RTEL1	Q9NZ71	1219 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	PDP2	Q9P2J9	529 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	TJP2	Q9UDY2	1190 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	INVS	Q9Y283	1065 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668		Q9Y3F1	56 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	UBIAD1	Q9Y5Z9	338 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668	MRFAP1	Q9Y605	127 aa		4.84	□□□□□ -1.63
SFPQ-210	ENST00000490668		A0A1W2PRQ8	180 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	VPS37C	A5D8V6	355 aa	Predicted RBP	4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	BTBD18	B2RXH4	712 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	FAM86B1	E9PN63	330 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668		J3QL48	77 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	ARVCF	O00192	962 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	NCAM2	O15394	837 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	DYNC1LI2	O43237	492 aa	Predicted RBP	4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	CCNT1	O60563	726 aa	Known RBP	4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	TUSC2	O75896	110 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	CABYR	O75952	493 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	ARIH2	O95376	493 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	TDP2	O95551	362 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	CP	P00450	1065 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	F11	P03951	625 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	SCG5	P05408	212 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	PYGL	P06737	847 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	MMP3	P08254	477 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	CYP3A4	P08684	503 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	FAM86B2	P0C5J1	330 aa		4.83	□□□□□ -1.64
SFPQ-210	ENST00000490668	EN2	P19622	333 aa	Predicted RBP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms