RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 FAM84AQ96KN4 292 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 SPAG5Q96R06 1193 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 GDF15Q99988 308 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 PI4K2AQ9BTU6 479 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 STK33Q9BYT3 514 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 TTYH3Q9C0H2 523 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 NRDE2Q9H7Z3 1164 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 GOLGA2P5Q9HBQ8 144 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 UBE2TQ9NPD8 197 aaPredicted RBP14.21□□□□□ -0.13
SNX12-205ENST00000490561 CXXC1Q9P0U4 656 aaPredicted RBP14.21□□□□□ -0.13
SNX12-205ENST00000490561 STK39Q9UEW8 545 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 DNAJC12Q9UKB3 198 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 CAPN11Q9UMQ6 739 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 FAN1Q9Y2M0 1017 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 RWDD3Q9Y3V2 267 aa14.21□□□□□ -0.13
SNX12-205ENST00000490561 TDRD15B5MCY1 1934 aaKnown RBP14.2□□□□□ -0.14
SNX12-205ENST00000490561 AKR1B15C9JRZ8 316 aaPredicted RBP14.2□□□□□ -0.14
SNX12-205ENST00000490561 TLL1O43897 1013 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 HUS1O60921 280 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 B3GAT3O94766 335 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 BMP8BP34820 402 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 ALDH7A1P49419 539 aaKnown RBP14.2□□□□□ -0.14
SNX12-205ENST00000490561 AARSP49588 968 aaKnown RBP eCLIP14.2□□□□□ -0.14
SNX12-205ENST00000490561 POLR2FP61218 127 aaKnown RBP14.2□□□□□ -0.14
SNX12-205ENST00000490561 ZBED6P86452 979 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 LRMPQ12912 555 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 SPOUT1Q5T280 376 aaKnown RBP14.2□□□□□ -0.14
SNX12-205ENST00000490561 IQCEQ6IPM2 695 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 PHLDB3Q6NSJ2 640 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 DPY19L2P1Q6NXN4 242 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 FAM117BQ6P1L5 589 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 TMEM86AQ8N2M4 240 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 FIBCD1Q8N539 461 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 SP7Q8TDD2 431 aaPredicted RBP14.2□□□□□ -0.14
SNX12-205ENST00000490561 ZNF558Q96NG5 402 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 NAA15Q9BXJ9 866 aaKnown RBP14.2□□□□□ -0.14
SNX12-205ENST00000490561 BCO2Q9BYV7 579 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 APOBEC3GQ9HC16 384 aaKnown RBP14.2□□□□□ -0.14
SNX12-205ENST00000490561 NXF1Q9UBU9 619 aaKnown RBP14.2□□□□□ -0.14
SNX12-205ENST00000490561 DSEQ9UL01 958 aa14.2□□□□□ -0.14
SNX12-205ENST00000490561 H0YGN5 161 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 NRP1O14786 923 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 PPEF2O14830 753 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 TACC1O75410 805 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 TADA2AO75478 443 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 GYPCP04921 128 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 GALTP07902 379 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 ODC1P11926 461 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 PPM1AP35813 382 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 STAT1P42224 750 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 ASPAP45381 313 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 BCAR1P56945 870 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 SPOPLQ6IQ16 392 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 DSTYKQ6XUX3 929 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 ARHGEF19Q8IW93 802 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 SPC24Q8NBT2 197 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 APPL2Q8NEU8 664 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 SYN2Q92777 582 aaPredicted RBP14.19□□□□□ -0.14
SNX12-205ENST00000490561 TATDN2Q93075 761 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 CWH43Q9H720 699 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 SNX9Q9Y5X1 595 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 FHOD1Q9Y613 1164 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 TRIP11Q15643 1979 aa14.19□□□□□ -0.14
SNX12-205ENST00000490561 FNDC1Q4ZHG4 1894 aaPredicted RBP14.18□□□□□ -0.14
SNX12-205ENST00000490561 SF3B1O75533 1304 aaKnown RBP eCLIP14.18□□□□□ -0.14
SNX12-205ENST00000490561 M0QZQ0 153 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 CYB561D2O14569 222 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 MFAP3LO75121 409 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 TYMPP19971 482 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 CASP14P31944 242 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 SLC11A1P49279 550 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 JAM2P57087 298 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 RAPGEF1Q13905 1077 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 ARID5BQ14865 1188 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 SHHQ15465 462 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 PTPN21Q16825 1174 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 RRAGAQ7L523 313 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 LIMS2Q7Z4I7 341 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 METTL23Q86XA0 190 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 SHC3Q92529 594 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 SUSD3Q96L08 255 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 SENP8Q96LD8 212 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 MMS19Q96T76 1030 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 NLRC4Q9NPP4 1024 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 ZNHIT6Q9NWK9 470 aaKnown RBP14.18□□□□□ -0.14
SNX12-205ENST00000490561 DNAJB4Q9UDY4 337 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 ADAM28Q9UKQ2 775 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 PCDHB8Q9UN66 801 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 PCDHB12Q9Y5F1 795 aa14.18□□□□□ -0.14
SNX12-205ENST00000490561 MRPL42Q9Y6G3 142 aaKnown RBP14.18□□□□□ -0.14
SNX12-205ENST00000490561 F8VZ95 297 aa14.17□□□□□ -0.14
SNX12-205ENST00000490561 RBAK-RBAKDNI3L0D1 243 aa14.17□□□□□ -0.14
SNX12-205ENST00000490561 SYN3O14994 580 aa14.17□□□□□ -0.14
SNX12-205ENST00000490561 EPHB6O15197 1021 aa14.17□□□□□ -0.14
SNX12-205ENST00000490561 SPTLC1O15269 473 aa14.17□□□□□ -0.14
SNX12-205ENST00000490561 NRDCO43847 1150 aa14.17□□□□□ -0.14
SNX12-205ENST00000490561 KIF4AO95239 1232 aa14.17□□□□□ -0.14
SNX12-205ENST00000490561 FERP16591 822 aa14.17□□□□□ -0.14
SNX12-205ENST00000490561 KRT9P35527 623 aa14.17□□□□□ -0.14
SNX12-205ENST00000490561 SOX5P35711 763 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms