RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 DUSP26Q9BV47 211 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 PACSIN1Q9BY11 444 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 CTTNBP2NLQ9P2B4 639 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 LRIT1Q9P2V4 623 aa5.09□□□□□ -1.59
HMGN1-218ENST00000490032 SPATA31A6Q5VVP1 1343 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 MASP2O00187 686 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 PROM1O43490 865 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 KATNA1O75449 491 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 CD1AP06126 327 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 CACNA2D1P54289 1103 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 ADKP55263 362 aaKnown RBP5.08□□□□□ -1.6
HMGN1-218ENST00000490032 KIF23Q02241 960 aaPredicted RBP5.08□□□□□ -1.6
HMGN1-218ENST00000490032 VWA1Q6PCB0 445 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 TMPRSS9Q7Z410 1059 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 CLNKQ7Z7G1 428 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 BOLLQ8N9W6 283 aaKnown RBP5.08□□□□□ -1.6
HMGN1-218ENST00000490032 ACTRT2Q8TDY3 377 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 MTMR8Q96EF0 704 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 CLPTM1LQ96KA5 538 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 LRFN3Q9BTN0 628 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 SEMA4GQ9NTN9 838 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 SERPINB13Q9UIV8 391 aa5.08□□□□□ -1.6
HMGN1-218ENST00000490032 CFAP20Q9Y6A4 193 aaKnown RBP5.08□□□□□ -1.6
HMGN1-218ENST00000490032 TNKSO95271 1327 aa5.07□□□□□ -1.6
HMGN1-218ENST00000490032 ANXA1P04083 346 aa5.07□□□□□ -1.6
HMGN1-218ENST00000490032 FOLR3P41439 243 aa5.07□□□□□ -1.6
HMGN1-218ENST00000490032 RPS7P62081 194 aaKnown RBP5.07□□□□□ -1.6
HMGN1-218ENST00000490032 MRPS21P82921 87 aaKnown RBP5.07□□□□□ -1.6
HMGN1-218ENST00000490032 ZNF844Q08AG5 666 aa5.07□□□□□ -1.6
HMGN1-218ENST00000490032 SF3B3Q15393 1217 aaKnown RBP5.07□□□□□ -1.6
HMGN1-218ENST00000490032 GADL1Q6ZQY3 521 aa5.07□□□□□ -1.6
HMGN1-218ENST00000490032 KAT5Q92993 513 aa5.07□□□□□ -1.6
HMGN1-218ENST00000490032 INTS13Q9NVM9 706 aa5.07□□□□□ -1.6
HMGN1-218ENST00000490032 CDYLQ9Y232 598 aa5.07□□□□□ -1.6
HMGN1-218ENST00000490032 WASHC2CQ9Y4E1 1318 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 E7ENX8 843 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 PEX1O43933 1283 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 C1QL1O75973 258 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 SUN1O94901 812 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 IGLV2-14P01704 120 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 RPLP2P05387 115 aaKnown RBP5.06□□□□□ -1.6
HMGN1-218ENST00000490032 ANXA11P50995 505 aaKnown RBP5.06□□□□□ -1.6
HMGN1-218ENST00000490032 FXR1P51114 621 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGN1-218ENST00000490032 POU6F2P78424 691 aaPredicted RBP5.06□□□□□ -1.6
HMGN1-218ENST00000490032 DSC2Q02487 901 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 NHLH1Q02575 133 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 TAP2Q03519 686 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 DYRK1AQ13627 763 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 ODF1Q14990 250 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 EFCAB2Q5VUJ9 269 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 TTC7BQ86TV6 843 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 CFAP52Q8N1V2 620 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 TMIEQ8NEW7 156 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 SIDT1Q9NXL6 827 aaKnown RBP5.06□□□□□ -1.6
HMGN1-218ENST00000490032 SLC45A2Q9UMX9 530 aa5.06□□□□□ -1.6
HMGN1-218ENST00000490032 CCDC195A0A1B0GUA6 201 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 NT5C1B-RDH14C9J2C7 533 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 MPPED1O15442 326 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 ZRANB2O95218 330 aaKnown RBP eCLIP5.05□□□□□ -1.66e-7■■□□□ 12.1
HMGN1-218ENST00000490032 MALP21145 153 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 GATA3P23771 443 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 FAM50AQ14320 339 aaKnown RBP5.05□□□□□ -1.6
HMGN1-218ENST00000490032 PTPN21Q16825 1174 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 NBPF8Q3BBV2 869 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 PNMA8AQ86V59 439 aaPredicted RBP5.05□□□□□ -1.6
HMGN1-218ENST00000490032 PDSS2Q86YH6 399 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 TMEM125Q96AQ2 219 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 LRIG1Q96JA1 1093 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 RSAD1Q9HA92 442 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 KIAA1586Q9HCI6 787 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 MAN1C1Q9NR34 630 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 SLC17A6Q9P2U8 582 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 SPEF1Q9Y4P9 236 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 TNFRSF18Q9Y5U5 241 aa5.05□□□□□ -1.6
HMGN1-218ENST00000490032 E9PLN8 166 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 F2RL2O00254 374 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 YY2O15391 372 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 MATN4O95460 622 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 C1RP00736 705 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 EVA1CP58658 441 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 FPGSQ05932 587 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 PIGFQ07326 219 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 SNAPC2Q13487 334 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 HLXQ14774 488 aaPredicted RBP5.04□□□□□ -1.6
HMGN1-218ENST00000490032 UAP1L1Q3KQV9 507 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 KHDC1Q4VXA5 237 aaKnown RBP5.04□□□□□ -1.6
HMGN1-218ENST00000490032 ADGRG5Q8IZF4 528 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 AOPEPQ8N6M6 819 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 PDPRQ8NCN5 879 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 VKORC1Q9BQB6 163 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 HEPHQ9BQS7 1158 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 ASPSCR1Q9BZE9 553 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 IMPG2Q9BZV3 1241 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 ADARB2Q9NS39 739 aaKnown RBP5.04□□□□□ -1.6
HMGN1-218ENST00000490032 RLIMQ9NVW2 624 aa5.04□□□□□ -1.6
HMGN1-218ENST00000490032 CCDC151A5D8V7 595 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 PROP1O75360 226 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 ZNF37AP17032 561 aaPredicted RBP5.03□□□□□ -1.6
HMGN1-218ENST00000490032 CYP2C19P33261 490 aa5.03□□□□□ -1.6
HMGN1-218ENST00000490032 IL12RB1P42701 662 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms