RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 PRKD2Q9BZL6 878 aa20.69■□□□□ 0.9
EPHB4-207ENST00000489808 PDE11AQ9HCR9 933 aa20.69■□□□□ 0.9
EPHB4-207ENST00000489808 CGNQ9P2M7 1197 aaKnown RBP20.69■□□□□ 0.9
EPHB4-207ENST00000489808 NR2E1Q9Y466 385 aa20.69■□□□□ 0.9
EPHB4-207ENST00000489808 TIMM13Q9Y5L4 95 aaPredicted RBP20.69■□□□□ 0.9
EPHB4-207ENST00000489808 ABLIM3O94929 683 aa20.68■□□□□ 0.9
EPHB4-207ENST00000489808 TYMPP19971 482 aa20.68■□□□□ 0.9
EPHB4-207ENST00000489808 TFAMQ00059 246 aaKnown RBP20.68■□□□□ 0.9
EPHB4-207ENST00000489808 LIN9Q5TKA1 542 aa20.68■□□□□ 0.9
EPHB4-207ENST00000489808 RTL10Q7L3V2 364 aa20.68■□□□□ 0.9
EPHB4-207ENST00000489808 FMR1NBQ8N0W7 255 aaPredicted RBP20.68■□□□□ 0.9
EPHB4-207ENST00000489808 SMG7Q92540 1137 aaKnown RBP20.68■□□□□ 0.9
EPHB4-207ENST00000489808 TSHZ2Q9NRE2 1034 aa20.68■□□□□ 0.9
EPHB4-207ENST00000489808 RHOBTB3O94955 611 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 C8AP07357 584 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 HNRNPA1P09651 372 aaKnown RBP eCLIP20.67■□□□□ 0.9
EPHB4-207ENST00000489808 ALADP13716 330 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 SP100P23497 879 aaPredicted RBP20.67■□□□□ 0.9
EPHB4-207ENST00000489808 ARPP19P56211 112 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 ROR1Q01973 937 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 YWHAHQ04917 246 aaPredicted RBP20.67■□□□□ 0.9
EPHB4-207ENST00000489808 SNW1Q13573 536 aaKnown RBP20.67■□□□□ 0.9
EPHB4-207ENST00000489808 SURF1Q15526 300 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 ZNF280DQ6N043 979 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 C12orf56Q8IXR9 622 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 C1orf127Q8N9H9 656 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 XXYLT1Q8NBI6 393 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 RDH13Q8NBN7 331 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 ENGASEQ8NFI3 743 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 CCDC47Q96A33 483 aaKnown RBP20.67■□□□□ 0.9
EPHB4-207ENST00000489808 BORCS6Q96GS4 357 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 PIDD1Q9HB75 910 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 WDR6Q9NNW5 1121 aaKnown RBP20.67■□□□□ 0.9
EPHB4-207ENST00000489808 USTQ9Y2C2 406 aa20.67■□□□□ 0.9
EPHB4-207ENST00000489808 WDR27A2RRH5 827 aa20.66■□□□□ 0.9
EPHB4-207ENST00000489808 C2CD4DB7Z1M9 353 aa20.66■□□□□ 0.9
EPHB4-207ENST00000489808 DCXO43602 365 aa20.66■□□□□ 0.9
EPHB4-207ENST00000489808 HOXA9P31269 272 aa20.66■□□□□ 0.9
EPHB4-207ENST00000489808 TAF6P49848 677 aa20.66■□□□□ 0.9
EPHB4-207ENST00000489808 CYP2J2P51589 502 aa20.66■□□□□ 0.9
EPHB4-207ENST00000489808 PPM1LQ5SGD2 360 aa20.66■□□□□ 0.9
EPHB4-207ENST00000489808 CCDC149Q6ZUS6 474 aa20.66■□□□□ 0.9
EPHB4-207ENST00000489808 USP37Q86T82 979 aa20.66■□□□□ 0.9
EPHB4-207ENST00000489808 GOLGA5Q8TBA6 731 aa20.66■□□□□ 0.9
EPHB4-207ENST00000489808 CCDC34Q96HJ3 373 aa20.66■□□□□ 0.9
EPHB4-207ENST00000489808 OXCT2Q9BYC2 517 aaPredicted RBP20.66■□□□□ 0.9
EPHB4-207ENST00000489808 MUTYHQ9UIF7 546 aa20.66■□□□□ 0.9
EPHB4-207ENST00000489808 AGAP1Q9UPQ3 857 aa20.66■□□□□ 0.9
EPHB4-207ENST00000489808 ARHGEF37A1IGU5 675 aa20.65■□□□□ 0.9
EPHB4-207ENST00000489808 CYP11A1P05108 521 aa20.65■□□□□ 0.9
EPHB4-207ENST00000489808 ATF2P15336 505 aa20.65■□□□□ 0.9
EPHB4-207ENST00000489808 SNRNP35Q16560 246 aaKnown RBP20.65■□□□□ 0.9
EPHB4-207ENST00000489808 TPGS2Q68CL5 300 aa20.65■□□□□ 0.9
EPHB4-207ENST00000489808 OTOP3Q7RTS5 596 aa20.65■□□□□ 0.9
EPHB4-207ENST00000489808 CSGALNACT2Q8N6G5 542 aa20.65■□□□□ 0.9
EPHB4-207ENST00000489808 CXorf38Q8TB03 319 aa20.65■□□□□ 0.9
EPHB4-207ENST00000489808 SLC7A14Q8TBB6 771 aa20.65■□□□□ 0.9
EPHB4-207ENST00000489808 C1QTNF1Q9BXJ1 281 aa20.65■□□□□ 0.9
EPHB4-207ENST00000489808 KCTD10Q9H3F6 313 aa20.65■□□□□ 0.9
EPHB4-207ENST00000489808 INTS13Q9NVM9 706 aa20.65■□□□□ 0.9
EPHB4-207ENST00000489808 TCHHQ07283 1943 aa20.65■□□□□ 0.9
EPHB4-207ENST00000489808 OR6C75A6NL08 312 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 KPNA7A9QM74 516 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 CYB561D2O14569 222 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 ITGB3P05106 788 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 ODC1P11926 461 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 POLR2BP30876 1174 aaKnown RBP20.64■□□□□ 0.89
EPHB4-207ENST00000489808 ELF1P32519 619 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 PNPLA4P41247 253 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 RBP5P82980 135 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 KCNB1Q14721 858 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 DUOXA2Q1HG44 320 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 SCARA3Q6AZY7 606 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 OVOS1Q6IE37 1185 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 ZDHHC14Q8IZN3 488 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 PLCD3Q8N3E9 789 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 TMEM174Q8WUU8 243 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 FAM84AQ96KN4 292 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 DMAC2Q9NW81 257 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 AFF4Q9UHB7 1163 aaKnown RBP20.64■□□□□ 0.89
EPHB4-207ENST00000489808 ITGA11Q9UKX5 1188 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 MAFFQ9ULX9 164 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 VWA8A3KMH1 1905 aa20.64■□□□□ 0.89
EPHB4-207ENST00000489808 PDXKO00764 312 aa20.63■□□□□ 0.89
EPHB4-207ENST00000489808 CCL16O15467 120 aa20.63■□□□□ 0.89
EPHB4-207ENST00000489808 EXOC3O60645 756 aa20.63■□□□□ 0.89
EPHB4-207ENST00000489808 XYLBO75191 536 aa20.63■□□□□ 0.89
EPHB4-207ENST00000489808 POU2F2P09086 479 aa20.63■□□□□ 0.89
EPHB4-207ENST00000489808 TMEM191BP0C7N4 346 aa20.63■□□□□ 0.89
EPHB4-207ENST00000489808 FAM160A1Q05DH4 1040 aa20.63■□□□□ 0.89
EPHB4-207ENST00000489808 PSMD6Q15008 389 aa20.63■□□□□ 0.89
EPHB4-207ENST00000489808 SV2CQ496J9 727 aa20.63■□□□□ 0.89
EPHB4-207ENST00000489808 LMBRD2Q68DH5 695 aaPredicted RBP20.63■□□□□ 0.89
EPHB4-207ENST00000489808 TCEAL8Q8IYN2 117 aa20.63■□□□□ 0.89
EPHB4-207ENST00000489808 LRRC52Q8N7C0 313 aa20.63■□□□□ 0.89
EPHB4-207ENST00000489808 TDRD5Q8NAT2 981 aaKnown RBP20.63■□□□□ 0.89
EPHB4-207ENST00000489808 OR5B17Q8NGF7 314 aa20.63■□□□□ 0.89
EPHB4-207ENST00000489808 ACSF2Q96CM8 615 aaPredicted RBP20.63■□□□□ 0.89
EPHB4-207ENST00000489808 ANKRD36BP1Q96IX9 119 aa20.63■□□□□ 0.89
EPHB4-207ENST00000489808 MFSD14AQ96MC6 490 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms