RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 SPTLC3Q9NUV7 552 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 TMEM39AQ9NV64 488 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 TUBGCP4Q9UGJ1 667 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 AGAP1Q9UPQ3 857 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 R3HCC1Q9Y3T6 440 aaKnown RBP15.19■□□□□ 0.02
VPS26A-205ENST00000489656 ADGRG1Q9Y653 693 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 KIAA0355O15063 1070 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 ZSCAN12O43309 604 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 CCDC175P0C221 793 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 PNMA6AP0CW24 399 aaPredicted RBP15.18■□□□□ 0.02
VPS26A-205ENST00000489656 P4HA1P13674 534 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 CLCN1P35523 988 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 MLH1P40692 756 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 PNPLA4P41247 253 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 ASPAP45381 313 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 KIF11P52732 1056 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 ARID5AQ03989 594 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 PTK2Q05397 1052 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 MYO1EQ12965 1108 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 ZNF571Q7Z3V5 609 aaPredicted RBP15.18■□□□□ 0.02
VPS26A-205ENST00000489656 DBF4BQ8NFT6 615 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 ELMO3Q96BJ8 720 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 ZFP42Q96MM3 310 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 GAD1Q99259 594 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 ARID3AQ99856 593 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 PPP1R12CQ9BZL4 782 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 CYP3A43Q9HB55 503 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 PPP2R2CQ9Y2T4 447 aa15.18■□□□□ 0.02
VPS26A-205ENST00000489656 ATP8B3O60423 1300 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 GOLGA6L9A6NEM1 432 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 ENPP3O14638 875 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 AKR1B10O60218 316 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 THP07101 528 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 CYP2C18P33260 490 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 ZNF132P52740 706 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 BPIFB4P59827 614 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 KRT83P78385 493 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 SOX4Q06945 474 aaPredicted RBP15.17■□□□□ 0.02
VPS26A-205ENST00000489656 GRIK3Q13003 919 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 BMS1Q14692 1282 aaKnown RBP15.17■□□□□ 0.02
VPS26A-205ENST00000489656 SLC18A3Q16572 532 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 ZNF662Q6ZS27 426 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 VPS36Q86VN1 386 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 TTC39CQ8N584 583 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 OLIG1Q8TAK6 271 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 SCLYQ96I15 445 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 ZNF560Q96MR9 790 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 DEF6Q9H4E7 631 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 TMEM161AQ9NX61 479 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 MIOSQ9NXC5 875 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 NENFQ9UMX5 172 aa15.17■□□□□ 0.02
VPS26A-205ENST00000489656 REXO2Q9Y3B8 237 aaKnown RBP15.17■□□□□ 0.02
VPS26A-205ENST00000489656 OFD1O75665 1012 aa15.16■□□□□ 0.02
VPS26A-205ENST00000489656 IPO7O95373 1038 aaKnown RBP15.16■□□□□ 0.02
VPS26A-205ENST00000489656 TIMP1P01033 207 aa15.16■□□□□ 0.02
VPS26A-205ENST00000489656 RPL9P32969 192 aaKnown RBP15.16■□□□□ 0.02
VPS26A-205ENST00000489656 CCL23P55773 120 aa15.16■□□□□ 0.02
VPS26A-205ENST00000489656 WDR72Q3MJ13 1102 aa15.16■□□□□ 0.02
VPS26A-205ENST00000489656 ZNF677Q86XU0 584 aa15.16■□□□□ 0.02
VPS26A-205ENST00000489656 REXO1L1PQ8IX06 675 aa15.16■□□□□ 0.02
VPS26A-205ENST00000489656 TMEM130Q8N3G9 435 aa15.16■□□□□ 0.02
VPS26A-205ENST00000489656 EPS8L1Q8TE68 723 aa15.16■□□□□ 0.02
VPS26A-205ENST00000489656 RSPH1Q8WYR4 309 aa15.16■□□□□ 0.02
VPS26A-205ENST00000489656 DESI2Q9BSY9 194 aa15.16■□□□□ 0.02
VPS26A-205ENST00000489656 GDAP2Q9NXN4 497 aa15.16■□□□□ 0.02
VPS26A-205ENST00000489656 NOCTQ9UK39 431 aaKnown RBP15.16■□□□□ 0.02
VPS26A-205ENST00000489656 POLIQ9UNA4 740 aa15.16■□□□□ 0.02
VPS26A-205ENST00000489656 PCDHB4Q9Y5E5 795 aa15.16■□□□□ 0.02
VPS26A-205ENST00000489656 PPEF2O14830 753 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 ZNF263O14978 683 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 CYP26A1O43174 497 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 KRT5P13647 590 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 PAX3P23760 479 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 USP8P40818 1118 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 TAF6P49848 677 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 SCNN1GP51170 649 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 TNNC1P63316 161 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 INCA1Q0VD86 236 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 SPA17Q15506 151 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 TCTN1Q2MV58 587 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 SV2CQ496J9 727 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 C10orf76Q5T2E6 689 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 CNKSR3Q6P9H4 555 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 GLB1LQ6UWU2 654 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 LIMS2Q7Z4I7 341 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 CRIPAKQ8N1N5 446 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 ACRBPQ8NEB7 543 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 SLC30A5Q8TAD4 765 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 PPP1R13BQ96KQ4 1090 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 AGPAT1Q99943 283 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 CISHQ9NSE2 258 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 RNF19AQ9NV58 838 aa15.15■□□□□ 0.02
VPS26A-205ENST00000489656 NXF1Q9UBU9 619 aaKnown RBP15.15■□□□□ 0.02
VPS26A-205ENST00000489656 A0A087X0T9 212 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 USP27XA6NNY8 438 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 CLSTN1O94985 981 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 FAM163BP0C2L3 166 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 FAM228BP0C875 321 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 CYP11B1P15538 503 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 PDE6CP51160 858 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms