RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 CYP27A1Q02318 531 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 ENPEPQ07075 957 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 SPAG1Q07617 926 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 DHX9Q08211 1270 aaKnown RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 KCNA1Q09470 495 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 HLTFQ14527 1009 aaKnown RBP eCLIP10.44□□□□□ -0.74
NOD1-208ENST00000489614 TTLL4Q14679 1199 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 IFI16Q16666 785 aaKnown RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 IQSEC1Q6DN90 963 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 RUFY4Q6ZNE9 571 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 NCCRP1Q6ZVX7 275 aaPredicted RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 GPIHBP1Q8IV16 184 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 CHMP6Q96FZ7 201 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 APBA2Q99767 749 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 CCDC113Q9H0I3 377 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 ABHD16BQ9H3Z7 469 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.44□□□□□ -0.74
NOD1-208ENST00000489614 TRIM43BA6NCK2 446 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 F8VZ95 297 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 SLC16A3O15427 465 aaKnown RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 ALDH1A1P00352 501 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 NMT1P30419 496 aaKnown RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 NCALDP61601 193 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 PPP2R2AP63151 447 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 TMED1Q13445 227 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 ACVR2BQ13705 512 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 LAMC2Q13753 1193 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 HERC4Q5GLZ8 1057 aaPredicted RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 CYP4F22Q6NT55 531 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 NFRKBQ6P4R8 1299 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 TRIM59Q8IWR1 403 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 MMGT1Q8N4V1 131 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 ZBTB8BQ8NAP8 495 aaPredicted RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 TRPV1Q8NER1 839 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 TRIM11Q96F44 468 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 CTAGE1Q96RT6 745 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 TMBIM4Q9HC24 238 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 STYXL1Q9Y6J8 313 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 C5orf60A6NFR6 353 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 MAPK13O15264 365 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 HEXIM1O94992 359 aaKnown RBP10.43□□□□□ -0.74
NOD1-208ENST00000489614 ATP6V1C1P21283 382 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 PSMC4P43686 418 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 NOGQ13253 232 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 ZC2HC1CQ53FD0 456 aaPredicted RBP10.43□□□□□ -0.74
NOD1-208ENST00000489614 OTUD6AQ7L8S5 288 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 EXOC3L1Q86VI1 746 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 ZNF784Q8NCA9 323 aaPredicted RBP10.43□□□□□ -0.74
NOD1-208ENST00000489614 MS4A14Q96JA4 679 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 HIC2Q96JB3 615 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 UPF3AQ9H1J1 476 aaKnown RBP10.43□□□□□ -0.74
NOD1-208ENST00000489614 RBM12Q9NTZ6 932 aaKnown RBP10.43□□□□□ -0.74
NOD1-208ENST00000489614 ZNF180Q9UJW8 692 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 SIK3Q9Y2K2 1263 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 USP20Q9Y2K6 914 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 SMIM23A6NLE4 172 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 PDLIM1O00151 329 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 HAS3O00219 553 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 MUM1Q2TAK8 710 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 EMC10Q5UCC4 262 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 SLC39A4Q6P5W5 647 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 MAP4K3Q8IVH8 894 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 IFT20Q8IY31 132 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 ATP8B4Q8TF62 1192 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 CLIP3Q96DZ5 547 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 TRIM47Q96LD4 638 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 CNOT6LQ96LI5 555 aaKnown RBP10.43□□□□□ -0.74
NOD1-208ENST00000489614 ERGIC2Q96RQ1 377 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 VCX3BQ9H321 246 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 VCX3AQ9NNX9 186 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 TMCO1Q9UM00 188 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 LRRC42Q9Y546 428 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 TANC1Q9C0D5 1861 aa10.43□□□□□ -0.74
NOD1-208ENST00000489614 A6NJR5 290 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 KRT86O43790 486 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 GH1P01241 217 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 MMP3P08254 477 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 RARAP10276 462 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 TXNP10599 105 aaKnown RBP10.42□□□□□ -0.74
NOD1-208ENST00000489614 CYBAP13498 195 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 ADCYAP1R1P41586 468 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 ADAM17P78536 824 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 SGSM1Q2NKQ1 1148 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 IFNLR1Q8IU57 520 aaPredicted RBP10.42□□□□□ -0.74
NOD1-208ENST00000489614 CSGALNACT2Q8N6G5 542 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 SMYD1Q8NB12 490 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 FAM167AQ96KS9 214 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 XPO6Q96QU8 1125 aaKnown RBP10.42□□□□□ -0.74
NOD1-208ENST00000489614 GOLGA6L10A0A0M3HER8 536 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 NCK2O43639 380 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 CTNNA1P35221 906 aaKnown RBP10.42□□□□□ -0.74
NOD1-208ENST00000489614 IFNAR2P48551 515 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 PEX5P50542 639 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 STAT5BP51692 787 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 CACNA2D1P54289 1103 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 FKBP3Q00688 224 aaKnown RBP10.42□□□□□ -0.74
NOD1-208ENST00000489614 RCN2Q14257 317 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 EMC2Q15006 297 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 FIGNQ5HY92 759 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 FAM160B1Q5W0V3 765 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms