RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 RRP1BQ14684 758 aaKnown RBP5.28□□□□□ -1.56
XRN1-213ENST00000489241 ATP2B3Q16720 1220 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 KHDC1Q4VXA5 237 aaKnown RBP5.28□□□□□ -1.56
XRN1-213ENST00000489241 PRAMEF14Q5SWL7 426 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 ZNF572Q7Z3I7 529 aaPredicted RBP5.28□□□□□ -1.56
XRN1-213ENST00000489241 HEATR3Q7Z4Q2 680 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 DPP9Q86TI2 863 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 GSPT2Q8IYD1 628 aaKnown RBP5.28□□□□□ -1.56
XRN1-213ENST00000489241 TRMT2AQ8IZ69 625 aaKnown RBP5.28□□□□□ -1.56
XRN1-213ENST00000489241 REPS2Q8NFH8 660 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 MYRIPQ8NFW9 859 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 PPM1EQ8WY54 764 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 ANKS1AQ92625 1134 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 MIEF2Q96C03 454 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 PDCD2LQ9BRP1 358 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 BTBD1Q9H0C5 482 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 MMRN2Q9H8L6 949 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 LMBRD1Q9NUN5 540 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 STAP2Q9UGK3 403 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 TPCN1Q9ULQ1 816 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 CLCA2Q9UQC9 943 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 PCDHA3Q9Y5H8 950 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 ZMYM3Q14202 1370 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 H3BUI4 141 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 PHGDHO43175 533 aaKnown RBP5.27□□□□□ -1.57
XRN1-213ENST00000489241 ADCY6O43306 1168 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 NBNO60934 754 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 PEX11BO96011 259 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 TYRP1P17643 537 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 ZNF543Q08ER8 600 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 RAB39AQ14964 217 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 SMN1Q16637 294 aaKnown RBP5.27□□□□□ -1.57
XRN1-213ENST00000489241 ANKRD42Q8N9B4 389 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 IL31RAQ8NI17 732 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 STON2Q8WXE9 905 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 SLC35A4Q96G79 324 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 VRK1Q99986 396 aaPredicted RBP5.27□□□□□ -1.57
XRN1-213ENST00000489241 CPPED1Q9BRF8 314 aaPredicted RBP5.27□□□□□ -1.57
XRN1-213ENST00000489241 HERPUD2Q9BSE4 406 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 CRB3Q9BUF7 120 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.27□□□□□ -1.57
XRN1-213ENST00000489241 LRRC27Q9C0I9 530 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 IKZF4Q9H2S9 585 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 C11orf21Q9P2W6 132 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 AJAP1Q9UKB5 411 aaPredicted RBP5.27□□□□□ -1.57
XRN1-213ENST00000489241 CORO2BQ9UQ03 480 aa5.27□□□□□ -1.57
XRN1-213ENST00000489241 USP19O94966 1318 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 PRR5-ARHGAP8B1AHC4 643 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 B5MCH6 92 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 NCK2O43639 380 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 GPR32O75388 356 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 ARIH2O95376 493 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 AMY1AP04745 511 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 SNRPA1P09661 255 aaKnown RBP5.26□□□□□ -1.57
XRN1-213ENST00000489241 RAP2AP10114 183 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 TYRP14679 529 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 DDCP20711 480 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 TNFSF4P23510 183 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 GUCY1A2P33402 732 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 IL6STP40189 918 aaPredicted RBP5.26□□□□□ -1.57
XRN1-213ENST00000489241 CREMQ03060 361 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 TLE1Q04724 770 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 BTKQ06187 659 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 SNAPC2Q13487 334 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 CNGB1Q14028 1251 aaPredicted RBP5.26□□□□□ -1.57
XRN1-213ENST00000489241 ELAVL1Q15717 326 aaKnown RBP5.26□□□□□ -1.57
XRN1-213ENST00000489241 METTL24Q5JXM2 366 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 DGKKQ5KSL6 1271 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 GADL1Q6ZQY3 521 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 Q6ZRM9 215 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 DOK3Q7L591 496 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 LDLRAD3Q86YD5 345 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 SH2D3CQ8N5H7 860 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 IFI44Q8TCB0 444 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 ST8SIA2Q92186 375 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 LARP4BQ92615 738 aaKnown RBP5.26□□□□□ -1.57
XRN1-213ENST00000489241 TMX3Q96JJ7 454 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 FAM167AQ96KS9 214 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 SELENOOQ9BVL4 669 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 WDR12Q9GZL7 423 aaKnown RBP5.26□□□□□ -1.57
XRN1-213ENST00000489241 UBA5Q9GZZ9 404 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 LDAHQ9H6V9 325 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 KIAA1586Q9HCI6 787 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 PNPOQ9NVS9 261 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 CALCOCO1Q9P1Z2 691 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 ABCF2Q9UG63 623 aa5.26□□□□□ -1.57
XRN1-213ENST00000489241 REXO2Q9Y3B8 237 aaKnown RBP5.26□□□□□ -1.57
XRN1-213ENST00000489241 A0A087X1B8 175 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 TBKBP1A7MCY6 615 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 MYO1FO00160 1098 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 TBX3O15119 743 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 PJA2O43164 708 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 STC2O76061 302 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 ALOX15P16050 662 aaPredicted RBP5.25□□□□□ -1.57
XRN1-213ENST00000489241 MALP21145 153 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 MAN2A2P49641 1150 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 SCNN1GP51170 649 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 CLRN1P58418 232 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 TUBB8Q3ZCM7 444 aa5.25□□□□□ -1.57
XRN1-213ENST00000489241 FAM209BQ5JX69 171 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms