RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 DPP7Q9UHL4 492 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 AGAP1Q9UPQ3 857 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 CTNND2Q9UQB3 1225 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 CITO14578 2027 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 C2orf71A6NGG8 1288 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 KPNA7A9QM74 516 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 M0QZQ0 153 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 ITGB3P05106 788 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 KRT19P08727 400 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 FAM163BP0C2L3 166 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 SRGAP2BP0DMP2 458 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 CCDC192P0DO97 292 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 FGFR3P22607 806 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 ATICP31939 592 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 SSTR3P32745 418 aaPredicted RBP13.41□□□□□ -0.26
COL4A5-206ENST00000489230 CA8P35219 290 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 PMS1P54277 932 aaKnown RBP13.41□□□□□ -0.26
COL4A5-206ENST00000489230 BFSP1Q12934 665 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 CAVIN1Q6NZI2 390 aaKnown RBP13.41□□□□□ -0.26
COL4A5-206ENST00000489230 ELMSAN1Q6PJG2 1045 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 ANKS3Q6ZW76 656 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 DPH6Q7L8W6 267 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 METTL23Q86XA0 190 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 CEP57Q86XR8 500 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 C1orf127Q8N9H9 656 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 POP1Q99575 1024 aaKnown RBP13.41□□□□□ -0.26
COL4A5-206ENST00000489230 SRRTQ9BXP5 876 aaKnown RBP13.41□□□□□ -0.26
COL4A5-206ENST00000489230 RXFP1Q9HBX9 757 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 C11orf16Q9NQ32 467 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 PCDHB8Q9UN66 801 aa13.41□□□□□ -0.26
COL4A5-206ENST00000489230 TDRD15B5MCY1 1934 aaKnown RBP13.41□□□□□ -0.26
COL4A5-206ENST00000489230 TRIM49BA6NDI0 452 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 LILRB3O75022 631 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 ADH1AP07327 375 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 ODC1P11926 461 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 TYMPP19971 482 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 POLR2BP30876 1174 aaKnown RBP13.4□□□□□ -0.26
COL4A5-206ENST00000489230 AARSP49588 968 aaKnown RBP eCLIP13.4□□□□□ -0.26
COL4A5-206ENST00000489230 STX17P56962 302 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 CETN1Q12798 172 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 STX1AQ16623 288 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 SGSM1Q2NKQ1 1148 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 CCDC40Q4G0X9 1142 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 PLPP4Q5VZY2 271 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 CD300LGQ6UXG3 332 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 TAS1R1Q7RTX1 841 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 FAM114A1Q8IWE2 563 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 GJD3Q8N144 294 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 CCDC150Q8NCX0 1101 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 OR5B17Q8NGF7 314 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 HASPINQ8TF76 798 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 RIN2Q8WYP3 895 aaPredicted RBP13.4□□□□□ -0.26
COL4A5-206ENST00000489230 PIK3R5Q8WYR1 880 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 TAF4BQ92750 862 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 BORCS6Q96GS4 357 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 HPDLQ96IR7 371 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 DUSP9Q99956 384 aaKnown RBP13.4□□□□□ -0.26
COL4A5-206ENST00000489230 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 MTMR12Q9C0I1 747 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 BACE2Q9Y5Z0 518 aa13.4□□□□□ -0.26
COL4A5-206ENST00000489230 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.39□□□□□ -0.27
COL4A5-206ENST00000489230 LRRIQ3A6PVS8 624 aaPredicted RBP13.39□□□□□ -0.27
COL4A5-206ENST00000489230 PRR33A8MZF0 331 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 F8W810 466 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 CYB561D2O14569 222 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 HUS1O60921 280 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 OAZ2O95190 189 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 STAU1O95793 577 aaKnown RBP13.39□□□□□ -0.27
COL4A5-206ENST00000489230 C4BPAP04003 597 aaKnown RBP13.39□□□□□ -0.27
COL4A5-206ENST00000489230 P4HA1P13674 534 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 KCNA5P22460 613 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 KLRC2P26717 231 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 IRS1P35568 1242 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 BRCC3P46736 316 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 GUCY2FP51841 1108 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 WNT7BP56706 349 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 BIRC3Q13489 604 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 PTPN14Q15678 1187 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 DPCR1Q3MIW9 517 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 LEXMQ3ZCV2 418 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 TCEAL5Q5H9L2 206 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 KRT39Q6A163 491 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 ALYREFQ86V81 257 aaKnown RBP13.39□□□□□ -0.27
COL4A5-206ENST00000489230 THEM5Q8N1Q8 247 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 TMEM86AQ8N2M4 240 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 C3orf58Q8NDZ4 430 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 LNX1Q8TBB1 728 aaPredicted RBP13.39□□□□□ -0.27
COL4A5-206ENST00000489230 SPATA18Q8TC71 538 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 ENOX1Q8TC92 643 aaKnown RBP13.39□□□□□ -0.27
COL4A5-206ENST00000489230 ZNF516Q92618 1163 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 SENP8Q96LD8 212 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 TMEM8AQ9HCN3 771 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 CD320Q9NPF0 282 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 GDAP2Q9NXN4 497 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 TMEM63CQ9P1W3 806 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 MAGEC2Q9UBF1 373 aaPredicted RBP13.39□□□□□ -0.27
COL4A5-206ENST00000489230 CACNG4Q9UBN1 327 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 MAFFQ9ULX9 164 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 NLRC5Q86WI3 1866 aa13.39□□□□□ -0.27
COL4A5-206ENST00000489230 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms