RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 YBX2Q9Y2T7 364 aaKnown RBP13.24□□□□□ -0.29
TRAIP-209ENST00000488860 COQ4Q9Y3A0 265 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 PCDHA11Q9Y5I1 949 aa13.24□□□□□ -0.29
TRAIP-209ENST00000488860 LINC01553A4QN01 128 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 SPTLC1O15269 473 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 PMM2O15305 246 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 ARHGEF15O94989 841 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 ASS1P00966 412 aaKnown RBP13.23□□□□□ -0.29
TRAIP-209ENST00000488860 PON1P27169 355 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 ZNF75DP51815 510 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 KCNMA1Q12791 1236 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 NR1I3Q14994 352 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 RAB30Q15771 203 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 WDR72Q3MJ13 1102 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 GJB7Q6PEY0 223 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 DCLRE1AQ6PJP8 1040 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 TMEM173Q86WV6 379 aaPredicted RBP13.23□□□□□ -0.29
TRAIP-209ENST00000488860 ARHGEF19Q8IW93 802 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 PPM1KQ8N3J5 372 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 NEK11Q8NG66 645 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 BCL7CQ8WUZ0 217 aaPredicted RBP13.23□□□□□ -0.29
TRAIP-209ENST00000488860 ERGIC2Q96RQ1 377 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 MMS19Q96T76 1030 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 PBX4Q9BYU1 374 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 XYLT2Q9H1B5 865 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 APOBEC3GQ9HC16 384 aaKnown RBP13.23□□□□□ -0.29
TRAIP-209ENST00000488860 ADAM28Q9UKQ2 775 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 MTUS1Q9ULD2 1270 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 SIK3Q9Y2K2 1263 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 PCDHB12Q9Y5F1 795 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 SNX9Q9Y5X1 595 aa13.23□□□□□ -0.29
TRAIP-209ENST00000488860 SF3B1O75533 1304 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRAIP-209ENST00000488860 MYH10P35580 1976 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 KPNA7A9QM74 516 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 TMEM189-UBE2V1I3L0A0 370 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 CSPG5O95196 566 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 P4HA1P13674 534 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 PPM1AP35813 382 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 RAP1GAPP47736 663 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 MRE11P49959 708 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 LILRA4P59901 499 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 PPP2R2DQ66LE6 453 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 RRAGAQ7L523 313 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 SLC39A11Q8N1S5 342 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 LMO3Q8TAP4 145 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 TAF4BQ92750 862 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 TATDN2Q93075 761 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 TMEM169Q96HH4 297 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 C17orf80Q9BSJ5 609 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 NIF3L1Q9GZT8 377 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 PRO3102Q9H379 93 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 SMYD3Q9H7B4 428 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 SIX2Q9NPC8 291 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 SPG21Q9NZD8 308 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 APEX2Q9UBZ4 518 aa13.22□□□□□ -0.29
TRAIP-209ENST00000488860 A0A1W2PQC6 194 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 CYB561D2O14569 222 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 ADCY5O95622 1261 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 STAU1O95793 577 aaKnown RBP13.21□□□□□ -0.29
TRAIP-209ENST00000488860 ODC1P11926 461 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 CD58P19256 250 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 TRIM21P19474 475 aaKnown RBP13.21□□□□□ -0.29
TRAIP-209ENST00000488860 RAPGEF1Q13905 1077 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 ARHGAP44Q17R89 818 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 TIGD5Q53EQ6 642 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 FUT10Q6P4F1 479 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 CD300LGQ6UXG3 332 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 TMC6Q7Z403 805 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 SPRED2Q7Z698 418 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 CLP1Q92989 425 aaKnown RBP13.21□□□□□ -0.29
TRAIP-209ENST00000488860 KAT5Q92993 513 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 IGSF21Q96ID5 467 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 SENP8Q96LD8 212 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 ARID3AQ99856 593 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 UBE2TQ9NPD8 197 aaPredicted RBP13.21□□□□□ -0.29
TRAIP-209ENST00000488860 AJAP1Q9UKB5 411 aaPredicted RBP13.21□□□□□ -0.29
TRAIP-209ENST00000488860 COLQQ9Y215 455 aaPredicted RBP13.21□□□□□ -0.29
TRAIP-209ENST00000488860 RWDD3Q9Y3V2 267 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 FHOD1Q9Y613 1164 aa13.21□□□□□ -0.29
TRAIP-209ENST00000488860 CARNS1A5YM72 827 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 EPHB6O15197 1021 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 TRAPPC3O43617 180 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 HUS1O60921 280 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 FGF18O76093 207 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 LINC00271P0C7V0 271 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 TBXAS1P24557 533 aaPredicted RBP13.2□□□□□ -0.3
TRAIP-209ENST00000488860 DNAJB2P25686 324 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 CA8P35219 290 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 ASPAP45381 313 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 POLR2FP61218 127 aaKnown RBP13.2□□□□□ -0.3
TRAIP-209ENST00000488860 TAP1Q03518 808 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 CUL2Q13617 745 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 KLHDC7AQ5VTJ3 777 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 PRPF38BQ5VTL8 546 aaKnown RBP13.2□□□□□ -0.3
TRAIP-209ENST00000488860 IQCEQ6IPM2 695 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 PHLDB3Q6NSJ2 640 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 CACNA2D4Q7Z3S7 1137 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 CEP57Q86XR8 500 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 VSTM4Q8IW00 320 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 DRC7Q8IY82 874 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms