RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 BLZF1Q9H2G9 400 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 TMEM206Q9H813 350 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 KCNK12Q9HB15 430 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 RBAKQ9NYW8 714 aaPredicted RBP19.22■□□□□ 0.67
ITGB1-215ENST00000488494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.22■□□□□ 0.671e-6■■□□□ 13.9
ITGB1-215ENST00000488494 KCNH3Q9ULD8 1083 aa19.22■□□□□ 0.67
ITGB1-215ENST00000488494 ANO9A1A5B4 782 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 GOLGA8IPA6NC78 632 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 GOLGA8JA6NMD2 632 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 SPTLC1O15269 473 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 ODC1P11926 461 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 ATF2P15336 505 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 ELF1P32519 619 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 LILRA4P59901 499 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 KRT85P78386 507 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 TDGQ13569 410 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 TPGS2Q68CL5 300 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 USP37Q86T82 979 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 SUGP1Q8IWZ8 645 aaKnown RBP19.21■□□□□ 0.67
ITGB1-215ENST00000488494 GRAMD1CQ8IYS0 662 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 RSAD2Q8WXG1 361 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 SPATA32Q96LK8 384 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 PCIF1Q9H4Z3 704 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 CYP4F11Q9HBI6 524 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 DPP3Q9NY33 737 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 INSL5Q9Y5Q6 135 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 MUC6Q6W4X9 2439 aa19.21■□□□□ 0.67
ITGB1-215ENST00000488494 ARHGEF37A1IGU5 675 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 PIRO00625 290 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 EIF3DO15371 548 aaKnown RBP eCLIP19.2■□□□□ 0.66
ITGB1-215ENST00000488494 EXTL3O43909 919 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 OAZ2O95190 189 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 SEC24AO95486 1093 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 PDGFBP01127 241 aaPredicted RBP19.2■□□□□ 0.66
ITGB1-215ENST00000488494 LRG1P02750 347 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 OR4Q2P0C623 313 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 AFMP43652 599 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 TFAMQ00059 246 aaKnown RBP19.2■□□□□ 0.66
ITGB1-215ENST00000488494 PABPC1LQ4VXU2 614 aaKnown RBP19.2■□□□□ 0.66
ITGB1-215ENST00000488494 OVOS1Q6IE37 1185 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 UNC13DQ70J99 1090 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 RTL10Q7L3V2 364 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 TCEAL8Q8IYN2 117 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 CEP57L1Q8IYX8 460 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 FBXL6Q8N531 539 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 SENP8Q96LD8 212 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 PYM1Q9BRP8 204 aaKnown RBP19.2■□□□□ 0.66
ITGB1-215ENST00000488494 IGSF9Q9P2J2 1179 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 DNMT3BQ9UBC3 853 aaKnown RBP19.2■□□□□ 0.66
ITGB1-215ENST00000488494 KMT2EQ8IZD2 1858 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 DOCK8Q8NF50 2099 aa19.2■□□□□ 0.66
ITGB1-215ENST00000488494 OR6C75A6NL08 312 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 ACTN4O43707 911 aaKnown RBP19.19■□□□□ 0.66
ITGB1-215ENST00000488494 LDHAP00338 332 aaKnown RBP19.19■□□□□ 0.66
ITGB1-215ENST00000488494 LAMP2P13473 410 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 PFKFB1P16118 471 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 TYMPP19971 482 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 HOXD13P35453 343 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 ADCY1Q08828 1119 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 CUL4BQ13620 913 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 RNF19BQ6ZMZ0 732 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 EPM2AIP1Q7L775 607 aaPredicted RBP19.19■□□□□ 0.66
ITGB1-215ENST00000488494 ST13P5Q8NFI4 369 aaPredicted RBP19.19■□□□□ 0.66
ITGB1-215ENST00000488494 ITFG1Q8TB96 612 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 FAM84AQ96KN4 292 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 AFF4Q9UHB7 1163 aaKnown RBP19.19■□□□□ 0.66
ITGB1-215ENST00000488494 CDH7Q9ULB5 785 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 DUSP12Q9UNI6 340 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 ZNF318Q5VUA4 2279 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 UBE4BO95155 1302 aa19.19■□□□□ 0.66
ITGB1-215ENST00000488494 NARSO43776 548 aaKnown RBP19.18■□□□□ 0.66
ITGB1-215ENST00000488494 SLFN14P0C7P3 912 aa19.18■□□□□ 0.66
ITGB1-215ENST00000488494 PAX3P23760 479 aa19.18■□□□□ 0.66
ITGB1-215ENST00000488494 TAF6P49848 677 aa19.18■□□□□ 0.66
ITGB1-215ENST00000488494 EHHADHQ08426 723 aa19.18■□□□□ 0.66
ITGB1-215ENST00000488494 HTR4Q13639 388 aa19.18■□□□□ 0.66
ITGB1-215ENST00000488494 NT5DC4Q86YG4 428 aa19.18■□□□□ 0.66
ITGB1-215ENST00000488494 NELFCDQ8IXH7 590 aa19.18■□□□□ 0.66
ITGB1-215ENST00000488494 GPD1LQ8N335 351 aa19.18■□□□□ 0.66
ITGB1-215ENST00000488494 ING5Q8WYH8 240 aa19.18■□□□□ 0.66
ITGB1-215ENST00000488494 FGF13Q92913 245 aa19.18■□□□□ 0.66
ITGB1-215ENST00000488494 ZNF560Q96MR9 790 aa19.18■□□□□ 0.66
ITGB1-215ENST00000488494 PGLYRP2Q96PD5 576 aa19.18■□□□□ 0.66
ITGB1-215ENST00000488494 OXCT2Q9BYC2 517 aaPredicted RBP19.18■□□□□ 0.66
ITGB1-215ENST00000488494 SERTAD1Q9UHV2 236 aa19.18■□□□□ 0.66
ITGB1-215ENST00000488494 A0A1B0GVL5 298 aa19.17■□□□□ 0.66
ITGB1-215ENST00000488494 RHOP08100 348 aa19.17■□□□□ 0.66
ITGB1-215ENST00000488494 POLR2BP30876 1174 aaKnown RBP19.17■□□□□ 0.66
ITGB1-215ENST00000488494 PLA2G5P39877 138 aa19.17■□□□□ 0.66
ITGB1-215ENST00000488494 VCPP55072 806 aaKnown RBP19.17■□□□□ 0.66
ITGB1-215ENST00000488494 SLC5A9Q2M3M2 681 aa19.17■□□□□ 0.66
ITGB1-215ENST00000488494 SV2CQ496J9 727 aa19.17■□□□□ 0.66
ITGB1-215ENST00000488494 NPAS3Q8IXF0 933 aa19.17■□□□□ 0.66
ITGB1-215ENST00000488494 C1orf127Q8N9H9 656 aa19.17■□□□□ 0.66
ITGB1-215ENST00000488494 PDE11AQ9HCR9 933 aa19.17■□□□□ 0.66
ITGB1-215ENST00000488494 HSPBP1Q9NZL4 362 aa19.17■□□□□ 0.66
ITGB1-215ENST00000488494 MRPS23Q9Y3D9 190 aaKnown RBP19.17■□□□□ 0.66
ITGB1-215ENST00000488494 ARIH1Q9Y4X5 557 aaPredicted RBP19.17■□□□□ 0.66
ITGB1-215ENST00000488494 YIPF1Q9Y548 306 aa19.17■□□□□ 0.66
ITGB1-215ENST00000488494 ZFP37Q9Y6Q3 630 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms