RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 YWHAHQ04917 246 aaPredicted RBP12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 KCNA1Q09470 495 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 TWF1Q12792 350 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 SLC39A14Q15043 492 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 KYAT1Q16773 422 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 POTEHQ6S545 545 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 RNF19BQ6ZMZ0 732 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 CCDC73Q6ZRK6 1079 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 ZNF720Q7Z2F6 126 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 USP37Q86T82 979 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 HS6ST3Q8IZP7 471 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 ZSWIM2Q8NEG5 633 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 BEST2Q8NFU1 509 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 NOC3LQ8WTT2 800 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 POMGNT1Q8WZA1 660 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 DNAJC19Q96DA6 116 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 TBC1D17Q9HA65 648 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 AGO2Q9UKV8 859 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 INSL5Q9Y5Q6 135 aa12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 ZFP37Q9Y6Q3 630 aaPredicted RBP12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 ZFHX2Q9C0A1 2572 aaPredicted RBP12.27□□□□□ -0.45
NIPAL3-207ENST00000488155 NUP210Q8TEM1 1887 aaPredicted RBP12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 M0QZQ0 153 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 NRG2O14511 850 aaPredicted RBP12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 GCNT3O95395 438 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 DCNP07585 359 aaKnown RBP12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 GJA1P17302 382 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 SNW1Q13573 536 aaKnown RBP12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 TMEM132DQ14C87 1099 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 SPATA1Q5VX52 437 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 C9orf57Q5W0N0 161 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 TPGS2Q68CL5 300 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 MTSS1LQ765P7 747 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 TCEAL8Q8IYN2 117 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 SPRYD3Q8NCJ5 442 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 KCNN1Q92952 543 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 SENP8Q96LD8 212 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 TMEM209Q96SK2 561 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 RTP3Q9BQQ7 232 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 PLA2G2FQ9BZM2 168 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 FOXQ1Q9C009 403 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 ZSCAN16Q9H4T2 348 aaPredicted RBP12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 ARHGEF3Q9NR81 526 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 AFF4Q9UHB7 1163 aaKnown RBP12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 KCNH3Q9ULD8 1083 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 RALGAPA1Q6GYQ0 2036 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 USP34Q70CQ2 3546 aa12.26□□□□□ -0.45
NIPAL3-207ENST00000488155 PATJQ8NI35 1801 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 ANAPC1Q9H1A4 1944 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 VPS13AQ96RL7 3174 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 SPTLC1O15269 473 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 LRRN2O75325 713 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 ADRB2P07550 413 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 POU2F2P09086 479 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 MYL4P12829 197 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 CCR2P41597 374 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 CASP5P51878 434 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 LILRA4P59901 499 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 DUSP4Q13115 394 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 TANGO2Q6ICL3 276 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 OVOS1Q6IE37 1185 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 SLFN12LQ6IEE8 588 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 CRELD2Q6UXH1 353 aaPredicted RBP12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 PDZD4Q76G19 769 aaPredicted RBP12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 RTL10Q7L3V2 364 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 GPIHBP1Q8IV16 184 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 ELMOD1Q8N336 334 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 DTWD2Q8NBA8 298 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 SAAL1Q96ER3 474 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 FAM84AQ96KN4 292 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 ZNF512Q96ME7 567 aaPredicted RBP12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 FGFBP2Q9BYJ0 223 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 IRF2BPLQ9H1B7 796 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 CRISPLD1Q9H336 500 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 ST6GALNAC4Q9H4F1 302 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 SLC2A4RGQ9NR83 387 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 CEP72Q9P209 647 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 SLC27A5Q9Y2P5 690 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 MYO15AQ9UKN7 3530 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 GREB1Q4ZG55 1949 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 SDK1Q7Z5N4 2213 aa12.25□□□□□ -0.45
NIPAL3-207ENST00000488155 GOLGA8IPA6NC78 632 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 GOLGA8JA6NMD2 632 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 PIRO00625 290 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 SPTLC2O15270 562 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 GFRA3O60609 400 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 PPP1R37O75864 691 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 SOAT2O75908 522 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 PRPF6O94906 941 aaKnown RBP12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 OAZ2O95190 189 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 VNN2O95498 520 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 GAP43P17677 238 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 CD72P21854 359 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 SCP2P22307 547 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 ADSSP30520 456 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 ABCD1P33897 745 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 NASPP49321 788 aaPredicted RBP12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 AARSP49588 968 aaKnown RBP eCLIP12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 NUBP1P53384 320 aa12.24□□□□□ -0.45
NIPAL3-207ENST00000488155 WNT7BP56706 349 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms