RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 PRMT7Q9NVM4 692 aaPredicted RBP3.03□□□□□ -1.92
DEPDC1-203ENST00000488146 RAB23Q9ULC3 237 aa3.03□□□□□ -1.92
DEPDC1-203ENST00000488146 TMA7Q9Y2S6 64 aaKnown RBP3.03□□□□□ -1.92
DEPDC1-203ENST00000488146 PCDHB5Q9Y5E4 795 aa3.03□□□□□ -1.92
DEPDC1-203ENST00000488146 HCFC2Q9Y5Z7 792 aa3.03□□□□□ -1.92
DEPDC1-203ENST00000488146 TET1Q8NFU7 2136 aa3.03□□□□□ -1.93
DEPDC1-203ENST00000488146 TSC2P49815 1807 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 OR6C75A6NL08 312 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 CHADO15335 359 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 TRAPPC3O43617 180 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 PSMD10O75832 226 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 UPP2O95045 317 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 CXCL14O95715 111 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 ZNF806P0C7X5 589 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 LAMP2P13473 410 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 KCNE1P15382 129 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 TGM1P22735 817 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 KLRC1P26715 233 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC16A2P36021 539 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 GMPRP36959 345 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 RAP1GAPP47736 663 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 PPP3CCP48454 512 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 EFNA5P52803 228 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 EXOSC10Q01780 885 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC14A1Q13336 389 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 TTC39BQ5VTQ0 682 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC8B1Q6J4K2 584 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 MRPL14Q6P1L8 145 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 LRRC55Q6ZSA7 311 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 FRMD5Q7Z6J6 570 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 MCPH1Q8NEM0 835 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 IL31RAQ8NI17 732 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 MICAL1Q8TDZ2 1067 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 PANK1Q8TE04 598 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 DNAJB3Q8WWF6 145 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 WASF1Q92558 559 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 ACDQ96AP0 544 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 HVCN1Q96D96 273 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 SPACA7Q96KW9 195 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 PIGSQ96S52 555 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 OSMRQ99650 979 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC30A3Q99726 388 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 ZDHHC5Q9C0B5 715 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 CSRNP2Q9H175 543 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 MFSD1Q9H3U5 465 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 TMEM206Q9H813 350 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 TUFT1Q9NNX1 390 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 FAM105AQ9NUU6 356 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 TYW1Q9NV66 732 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 EHD2Q9NZN4 543 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 SMG5Q9UPR3 1016 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 FNDC3AQ9Y2H6 1198 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 SIT1Q9Y3P8 196 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 DOCK5Q9H7D0 1870 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 TDRD15B5MCY1 1934 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 HELZP42694 1942 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 TLDC2A0PJX2 215 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 CCDC69A6NI79 296 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 E7EWF7 191 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 TAF4O00268 1085 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 IFIT3O14879 490 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 LINC01565O15544 149 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 LAMTOR5O43504 91 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 MGEA5O60502 916 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 CDKL5O76039 1030 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 ALDH2P05091 517 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 IFNAR1P17181 557 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 AARSP49588 968 aaKnown RBP eCLIP3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 ERVFC1P60507 584 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 FCHO2Q0JRZ9 810 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 C21orf62-AS1Q17RA5 79 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC35G1Q2M3R5 365 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 MTERF2Q49AM1 385 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 ARHGAP29Q52LW3 1261 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 SEZ6Q53EL9 994 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 PRSS36Q5K4E3 855 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 ZSCAN30Q86W11 494 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 GALNT12Q8IXK2 581 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 MAML2Q8IZL2 1156 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC44A3Q8N4M1 653 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 FANCBQ8NB91 859 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 CEP76Q8TAP6 659 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 GAB3Q8WWW8 586 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 PPM1EQ8WY54 764 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 PHKBQ93100 1093 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 ABHD17AQ96GS6 310 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 NRDE2Q9H7Z3 1164 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 RSAD1Q9HA92 442 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 FBRSQ9HAH7 460 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 LIN7BQ9HAP6 207 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 CUEDC1Q9NWM3 386 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 ZDHHC3Q9NYG2 299 aa3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 SUPT16HQ9Y5B9 1047 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-203ENST00000488146 A0A1B0GTH6 734 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 MYBPHLA2RUH7 354 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 H3BM21 787 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 H3BQ06 376 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 LAD1O00515 517 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ENC1O14682 589 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms